BLASTX nr result

ID: Bupleurum21_contig00035149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035149
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39664.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   120   9e-26
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23

>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/130 (47%), Positives = 88/130 (67%)
 Frame = -2

Query: 456 RGEHCVVFLKMMLSEGLIPDQDTLANLISFLAKQSQLHKILPAISEVMSNYEILSPAMHN 277
           R E    F  +M+SEGL+PD +T+A L+S L K SQLH IL AI ++ S+ EIL+ +M+N
Sbjct: 380 RTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYN 439

Query: 276 MLIQSIWNEGFKTEASSLLDNMLDKGWIPDSDTHKLFISSSVPKKIDYKMSRQKNVNVQD 97
           +LI  +  EG+K+EA  LLD ML+KGW+PD+ TH L I S V +    +    +N  +QD
Sbjct: 440 LLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQD 499

Query: 96  KVSSILSEGL 67
           K+ +IL+EGL
Sbjct: 500 KIGNILAEGL 509


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/130 (47%), Positives = 88/130 (67%)
 Frame = -2

Query: 456 RGEHCVVFLKMMLSEGLIPDQDTLANLISFLAKQSQLHKILPAISEVMSNYEILSPAMHN 277
           R E    F  +M+SEGL+PD +T+A L+S L K SQLH IL AI ++ S+ EIL+ +M+N
Sbjct: 598 RTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYN 657

Query: 276 MLIQSIWNEGFKTEASSLLDNMLDKGWIPDSDTHKLFISSSVPKKIDYKMSRQKNVNVQD 97
           +LI  +  EG+K+EA  LLD ML+KGW+PD+ TH L I S V +    +    +N  +QD
Sbjct: 658 LLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQD 717

Query: 96  KVSSILSEGL 67
           K+ +IL+EGL
Sbjct: 718 KIGNILAEGL 727


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/130 (47%), Positives = 88/130 (67%)
 Frame = -2

Query: 456 RGEHCVVFLKMMLSEGLIPDQDTLANLISFLAKQSQLHKILPAISEVMSNYEILSPAMHN 277
           R E    F  +M+SEGL+PD +T+A L+S L K SQLH IL AI ++ S+ EIL+ +M+N
Sbjct: 598 RTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYN 657

Query: 276 MLIQSIWNEGFKTEASSLLDNMLDKGWIPDSDTHKLFISSSVPKKIDYKMSRQKNVNVQD 97
           +LI  +  EG+K+EA  LLD ML+KGW+PD+ TH L I S V +    +    +N  +QD
Sbjct: 658 LLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENSCMQD 717

Query: 96  KVSSILSEGL 67
           K+ +IL+EGL
Sbjct: 718 KIGNILAEGL 727


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/133 (44%), Positives = 89/133 (66%)
 Frame = -2

Query: 456 RGEHCVVFLKMMLSEGLIPDQDTLANLISFLAKQSQLHKILPAISEVMSNYEILSPAMHN 277
           R + C +FL +M+++GL+PD DTL NL+S LAK SQL+ I  ++ ++ S+ E+L  AM+N
Sbjct: 593 RIKDCSMFLNVMINKGLVPDSDTLYNLLSCLAKHSQLYLISVSLDKLASDCEVLDSAMYN 652

Query: 276 MLIQSIWNEGFKTEASSLLDNMLDKGWIPDSDTHKLFISSSVPKKIDYKMSRQKNVNVQD 97
           +LI  +W EG K +A  LLD ML+KGW+PD+ TH L I S+  ++    M    +++ +D
Sbjct: 653 ILINGMWKEGNKNDARRLLDLMLEKGWVPDAMTHGLLIGSADMEEKGEGMLAYVDLSTKD 712

Query: 96  KVSSILSEGLA*T 58
            V  IL+EGL  T
Sbjct: 713 GVGDILAEGLGET 725


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 5/134 (3%)
 Frame = -2

Query: 444 CVVFLKMMLSEGLIPDQDTLANLISFLAKQSQLHKILPAISEVMSNYEILSPAMHNMLIQ 265
           C +FL +M++EGL+PD DTL  L+S LA  SQL+ I  ++ +++S+ E+L  AM+N+LI 
Sbjct: 597 CTLFLNVMVNEGLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAMYNILIN 656

Query: 264 SIWNEGFKTEASSLLDNMLDKGWIPDSDTHKLFISSSVPK-----KIDYKMSRQKNVNVQ 100
            +W EG K EA  LLD ML+KGW+PDS TH L I S   +     K+ Y  S      ++
Sbjct: 657 GLWKEGNKNEAHRLLDLMLEKGWVPDSMTHGLLIGSGNREGTGKGKLTYVDS------IK 710

Query: 99  DKVSSILSEGLA*T 58
           D VS IL EGL  T
Sbjct: 711 DSVSDILVEGLGET 724


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