BLASTX nr result

ID: Bupleurum21_contig00035143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035143
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   111   1e-22
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   110   3e-22
emb|CBI27197.3| unnamed protein product [Vitis vinifera]              110   3e-22
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   108   6e-22
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   106   3e-21

>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  111 bits (277), Expect = 1e-22
 Identities = 53/118 (44%), Positives = 78/118 (66%)
 Frame = -2

Query: 627  HHHDRLKFPILSVDCMPQVHSSCSGQQKKIVEATLSKAGTGPNTTTLQRRPMKDVWSDSE 448
            +  DR   P L +   P   SS     +K++E  + + G+G ++  L+++   D WS+ E
Sbjct: 1747 NQQDRDVPPTLGLGQRPTTFSSFPENHRKVLENIMMRTGSG-SSNLLKKKSRSDGWSEDE 1805

Query: 447  LDSLWIGVRRHGRGNWEGMLQDPRLRFSDCKTAEDLNFRWEKEKLKVQNVPAHPLQQN 274
            LDSLWIGVRRHGRGNW+ ML+DP+L+FS  KT+EDL+ RWE+E++KV   P  P Q++
Sbjct: 1806 LDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPAQRS 1863


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/129 (42%), Positives = 82/129 (63%)
 Frame = -2

Query: 603  PILSVDCMPQVHSSCSGQQKKIVEATLSKAGTGPNTTTLQRRPMKDVWSDSELDSLWIGV 424
            P L +   P   SS     +K++E  + + G+G +    +++   + WS+ ELD LWIGV
Sbjct: 1771 PTLGLGQTPATLSSFPENHRKVLENIMMRTGSG-SMNLFKKKSRVEGWSEDELDFLWIGV 1829

Query: 423  RRHGRGNWEGMLQDPRLRFSDCKTAEDLNFRWEKEKLKVQNVPAHPLQQNPFLEGFVKYS 244
            RRHGRGNW+ ML+DPRL+FS  KTA+DL+ RWE+E+LK+   PA P+ ++       K S
Sbjct: 1830 RRHGRGNWDAMLRDPRLKFSKYKTADDLSARWEEEQLKILEGPALPMPKSSKSTKGNKSS 1889

Query: 243  IPPSVSGGV 217
            + PS+S G+
Sbjct: 1890 LFPSISDGM 1898


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/129 (42%), Positives = 82/129 (63%)
 Frame = -2

Query: 603  PILSVDCMPQVHSSCSGQQKKIVEATLSKAGTGPNTTTLQRRPMKDVWSDSELDSLWIGV 424
            P L +   P   SS     +K++E  + + G+G +    +++   + WS+ ELD LWIGV
Sbjct: 1158 PTLGLGQTPATLSSFPENHRKVLENIMMRTGSG-SMNLFKKKSRVEGWSEDELDFLWIGV 1216

Query: 423  RRHGRGNWEGMLQDPRLRFSDCKTAEDLNFRWEKEKLKVQNVPAHPLQQNPFLEGFVKYS 244
            RRHGRGNW+ ML+DPRL+FS  KTA+DL+ RWE+E+LK+   PA P+ ++       K S
Sbjct: 1217 RRHGRGNWDAMLRDPRLKFSKYKTADDLSARWEEEQLKILEGPALPMPKSSKSTKGNKSS 1276

Query: 243  IPPSVSGGV 217
            + PS+S G+
Sbjct: 1277 LFPSISDGM 1285


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  108 bits (271), Expect = 6e-22
 Identities = 56/149 (37%), Positives = 87/149 (58%)
 Frame = -2

Query: 603  PILSVDCMPQVHSSCSGQQKKIVEATLSKAGTGPNTTTLQRRPMKDVWSDSELDSLWIGV 424
            P+L +  MP   +S     +K++E  + + G+G N    +++   D WS+ ELD LWIGV
Sbjct: 1681 PMLGLGQMPSTFTSFPENHRKVLENIMMRTGSGSNNL-YRKKSRTDGWSEDELDFLWIGV 1739

Query: 423  RRHGRGNWEGMLQDPRLRFSDCKTAEDLNFRWEKEKLKVQNVPAHPLQQNPFLEGFVKYS 244
            RRHGRGNW+ ML+DPRL+FS  K+++DL  RWE+E++K+ + P  P  +   L    K S
Sbjct: 1740 RRHGRGNWDAMLRDPRLKFSKYKSSDDLAARWEEEQMKILDGPPLPGSKTIKLSKSSKPS 1799

Query: 243  IPPSVSGGVSNSEVKDVAESSSPKSNLPH 157
            + PS+  G+    +      + PK +  H
Sbjct: 1800 LFPSIPEGMMARALHGSRLVAPPKFHQAH 1828


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  106 bits (265), Expect = 3e-21
 Identities = 54/129 (41%), Positives = 80/129 (62%)
 Frame = -2

Query: 603  PILSVDCMPQVHSSCSGQQKKIVEATLSKAGTGPNTTTLQRRPMKDVWSDSELDSLWIGV 424
            P L +  MP    S     +K++E  + + G+G +++   ++   DVWS+ ELD LW+GV
Sbjct: 1766 PTLGLGQMPSSFPSFPENHRKVLENIIMRTGSG-SSSLYSKKSKVDVWSEDELDFLWVGV 1824

Query: 423  RRHGRGNWEGMLQDPRLRFSDCKTAEDLNFRWEKEKLKVQNVPAHPLQQNPFLEGFVKYS 244
            RR+GRGNW+ ML+DPRL+FS  KT+EDL  RWE+E+LK  +  A PL +        K S
Sbjct: 1825 RRYGRGNWDAMLRDPRLKFSKYKTSEDLAVRWEEEQLKFLDGSAFPLLKTLKATKSSKSS 1884

Query: 243  IPPSVSGGV 217
            + PS+  G+
Sbjct: 1885 LFPSIPEGM 1893


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