BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035126
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   146   4e-33
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   114   2e-23
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   112   1e-22
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...   104   2e-20
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   103   5e-20

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  146 bits (369), Expect = 4e-33
 Identities = 77/244 (31%), Positives = 127/244 (52%)
 Frame = +1

Query: 4    CPLCQNSVESILHTLVSCPFTESCRVAAALPEVPGEFITFGDWLQALFSHDKNAVIIHSV 183
            CP+C++ +E+ LH LV C         + L  + G F +F DWL  +F++    V    +
Sbjct: 549  CPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYL 608

Query: 184  MLCWMVWKNRNDLVWNQRCLTVLEVVNSALSVLDQWQYVQDKNFTPSISLLTLEDGRISW 363
             +CW +W  RND+VWN R     +VVN   ++L+ W +  +   T     +T+      W
Sbjct: 609  AVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANETLAT----AVTVPSYSSKW 664

Query: 364  QAPQCNRVKINTDASLFTNPDRFSHAQIVRDHNGHLIEAKSKCIQGTVTPELAEAIGIRE 543
            Q P    +KIN D ++F  PD+ +   + RDH G  +   +K       P++ EA+G+RE
Sbjct: 665  QKPDYGWIKINVDGAVF--PDKGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVRE 722

Query: 544  ALSWVKEKKENNVTVETDCLMIVQWIRSSYNSLSYVGRVVEECRQLLMGLQKQNVMLRFV 723
             LSW+ E+  + + VETDCL +VQ I+      +  G ++ +C  +L  L   +V + + 
Sbjct: 723  VLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHL--VDVQVVYA 780

Query: 724  KRSA 735
            +RSA
Sbjct: 781  RRSA 784


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  114 bits (285), Expect = 2e-23
 Identities = 59/184 (32%), Positives = 98/184 (53%)
 Frame = +1

Query: 184 MLCWMVWKNRNDLVWNQRCLTVLEVVNSALSVLDQWQYVQDKNFTPSISLLTLEDGRISW 363
           M+ W +W+ RND VW+ +       V  A  +L QWQ  ++   T    +       I+W
Sbjct: 1   MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATT---QVQQSPQDTIAW 57

Query: 364 QAPQCNRVKINTDASLFTNPDRFSHAQIVRDHNGHLIEAKSKCIQGTVTPELAEAIGIRE 543
           Q P    +K N DA++F+  +RF     VRD  G  ++A +   +G   P+ AEA+G+R+
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 544 ALSWVKEKKENNVTVETDCLMIVQWIRSSYNSLSYVGRVVEECRQLLMGLQKQNVMLRFV 723
           A+ W+ + + +NV +E DC ++V  I    N+ +  G ++++CR LL   Q  N  + FV
Sbjct: 118 AILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQ--QFTNFKISFV 175

Query: 724 KRSA 735
           +R A
Sbjct: 176 RRQA 179


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  112 bits (279), Expect = 1e-22
 Identities = 70/244 (28%), Positives = 117/244 (47%)
 Frame = +1

Query: 4   CPLCQNSVESILHTLVSCPFTESCRVAAALPEVPGEFITFGDWLQALFSHDKNAVIIHSV 183
           CP C +  E+I+H LV C  T        L +   +     +  +++F H  ++++   V
Sbjct: 225 CPCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFV 284

Query: 184 MLCWMVWKNRNDLVWNQRCLTVLEVVNSALSVLDQWQYVQDKNFTPSISLLTLEDGRISW 363
           +L W +W N ND+VWN + L+   V + A S L QW   +       +       G   W
Sbjct: 285 VLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGR-HFAGGDCLW 343

Query: 364 QAPQCNRVKINTDASLFTNPDRFSHAQIVRDHNGHLIEAKSKCIQGTVTPELAEAIGIRE 543
           Q P   + K+N DAS      +   + ++RD+ G  I            P++AEA  ++E
Sbjct: 344 QKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAWALKE 403

Query: 544 ALSWVKEKKENNVTVETDCLMIVQWIRSSYNSLSYVGRVVEECRQLLMGLQKQNVMLRFV 723
           ALSW+  K    V +ETDCL  ++ +    +  SY+  ++++C+ LL  L + N++  FV
Sbjct: 404 ALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNLV--FV 461

Query: 724 KRSA 735
             SA
Sbjct: 462 YGSA 465


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score =  104 bits (259), Expect = 2e-20
 Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
 Frame = +1

Query: 1   VCPLCQNSVESILHTLVSCPFTESCRVAAALPEVPGEFITFGDWLQALFSHDKNAVIIHS 180
           +CPLC N  ESI H L+ C F +   V + L        +  DWLQ +F+    +     
Sbjct: 82  LCPLCSNPGESIYHALIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTWHCI 141

Query: 181 VMLCWMVWKNRNDLVWNQRCLTVLEVVNSALSVLDQWQYVQDKNFTPSISLLTLEDGRIS 360
             + W +W +RN++VWN +     ++V+ A++ L +W   Q  N     +          
Sbjct: 142 AAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVFNHNLAK 201

Query: 361 WQAPQCNRVKINTDASLFTNPDRFSHAQIVRDHNGHLIEAK-SKCIQGTVTPELAEAIGI 537
           W+ P+   +K N DAS F          ++R+  G L+ A+ +  +Q  +  +LAEA+  
Sbjct: 202 WKKPKSGSLKCNVDASTFNQQGMIGAGYVLRNTEGALLGARITSFVQSDLNLKLAEALSF 261

Query: 538 REALSWVK 561
           REALSW K
Sbjct: 262 REALSWTK 269


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  103 bits (256), Expect = 5e-20
 Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
 Frame = +1

Query: 4    CPLCQNSVESILHTLVSCPFTESCRVAAAL-------PEVPGEF-ITFGDWLQALFSHDK 159
            C LC+N  E  +H    C  +  C     L        ++   F +T  + LQ L S  +
Sbjct: 1458 CALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQR 1517

Query: 160  NAVIIHSVMLCWMVWKNRNDLVWNQRCLTVLEVVNSALSVLDQWQYVQDKNFTPSISLLT 339
              VI   VM  W +WK RND +W    +T   V +  L++L  WQ  QD           
Sbjct: 1518 --VIWACVM--WSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQD----------- 1562

Query: 340  LEDGRISWQAPQCNRVKINTDASLFTNPDRFSHAQIVRDHNGHLIEAKSKCIQGTVTPEL 519
                   W+ P     K N DA+ F   +R      +RD +G L++A++      +    
Sbjct: 1563 ------IWRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPE 1616

Query: 520  AEAIGIREALSWVKEKKENNVTVETDCLMIVQWIRSSYNSLSYVGRVVEECRQLLMGLQK 699
             EAIG+  A+ W KE+  NN+T E D   +V    ++ N +S +G ++ ECR        
Sbjct: 1617 GEAIGLLYAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSF-F 1675

Query: 700  QNVMLRFVKRSA 735
             N  + F++R A
Sbjct: 1676 TNSRVEFIRRQA 1687