BLASTX nr result

ID: Bupleurum21_contig00035107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035107
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310241.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003612032.1| U-box domain-containing protein [Medicago tr...    67   1e-09
ref|XP_003612031.1| U-box domain-containing protein [Medicago tr...    67   1e-09
emb|CBI19709.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002281339.1| PREDICTED: U-box domain-containing protein 5...    65   7e-09

>ref|XP_002310241.1| predicted protein [Populus trichocarpa] gi|222853144|gb|EEE90691.1|
           predicted protein [Populus trichocarpa]
          Length = 747

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = +2

Query: 2   TCPKTERKLSHLNLTPNVVIKNLISRWCTKYGVTILDPCMQSKANQLRQASLTSI 166
           TCPKT+ KL+H  LTPN  IK+LIS+WC KYG+TI DPC+Q  A++L   S+ SI
Sbjct: 311 TCPKTKVKLTHRALTPNTCIKDLISKWCVKYGITIPDPCIQ--ASKLLDISVNSI 363


>ref|XP_003612032.1| U-box domain-containing protein [Medicago truncatula]
           gi|355513367|gb|AES94990.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 767

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +2

Query: 5   CPKTERKLSHLNLTPNVVIKNLISRWCTKYGVTILDPCMQSKANQLRQASLTSI 166
           CPKTE++L H+ LTPN+V+K+LIS+WC   GVTI DP   ++   L  AS+TSI
Sbjct: 314 CPKTEKELPHMTLTPNIVMKDLISKWCKNNGVTIPDPSRHTEDFMLLDASITSI 367


>ref|XP_003612031.1| U-box domain-containing protein [Medicago truncatula]
           gi|355513366|gb|AES94989.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 739

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +2

Query: 5   CPKTERKLSHLNLTPNVVIKNLISRWCTKYGVTILDPCMQSKANQLRQASLTSI 166
           CPKTE++L H+ LTPN+V+K+LIS+WC   GVTI DP   ++   L  AS+TSI
Sbjct: 286 CPKTEKELPHMTLTPNIVMKDLISKWCKNNGVTIPDPSRHTEDFMLLDASITSI 339


>emb|CBI19709.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/47 (59%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   TCPKTERKLSHLNLTPNVVIKNLISRWCTKYGVTILDPCMQSKANQL 142
           TCPKT  KLS   LTPN  +KNLISRWC K+G++I DPC Q     L
Sbjct: 212 TCPKTHEKLSQFFLTPNSTMKNLISRWCLKHGISISDPCSQQAPESL 258


>ref|XP_002281339.1| PREDICTED: U-box domain-containing protein 5-like [Vitis vinifera]
          Length = 766

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/47 (59%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   TCPKTERKLSHLNLTPNVVIKNLISRWCTKYGVTILDPCMQSKANQL 142
           TCPKT  KLS   LTPN  +KNLISRWC K+G++I DPC Q     L
Sbjct: 294 TCPKTHEKLSQFFLTPNSTMKNLISRWCLKHGISISDPCSQQAPESL 340


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