BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035081
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   111   1e-27
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   107   4e-27
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   104   7e-27
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    94   9e-27
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   101   9e-27

>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  111 bits (277), Expect(2) = 1e-27
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = +2

Query: 32  TKLMNDHGILHQTSCSHRPQQNARVECKHRHILDVTRALKLQSGLSNEHWGDCVLAATYI 211
           T     HGILHQTSC   PQQN RVE KHRHIL+V RA   Q  L  + WG+ +L AT++
Sbjct: 635 TPYFQTHGILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHL 694

Query: 212 INRIPSSVLQNISPYEMLFKESPAYDQLKVFWLLSY 319
           INR PS+VL+  +PYE+LF E P+YD L+ F  L Y
Sbjct: 695 INRTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCY 730



 Score = 36.6 bits (83), Expect(2) = 1e-27
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 294 LKFFGCLAMAAPPGISTDKLKPRALPCVFVGYPSLKKGFKL 416
           L+ FGCL  A     + DK   R+  CVF+GYP  KK +++
Sbjct: 722 LRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRV 762


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  107 bits (268), Expect(2) = 4e-27
 Identities = 53/101 (52%), Positives = 66/101 (65%)
 Frame = +2

Query: 2   NAPEFSDKVCTKLMNDHGILHQTSCSHRPQQNARVECKHRHILDVTRALKLQSGLSNEHW 181
           N PEF     T+  +  GILHQTSC + PQQN  VE KHRH+L+V RAL  QS L    W
Sbjct: 655 NGPEFKH---TQFYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFW 711

Query: 182 GDCVLAATYIINRIPSSVLQNISPYEMLFKESPAYDQLKVF 304
           GD +L A Y+INR P+ +LQ  +P+E LF +SP Y  L+VF
Sbjct: 712 GDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVF 752



 Score = 38.5 bits (88), Expect(2) = 4e-27
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +3

Query: 291 NLKFFGCLAMAAPPGISTDKLKPRALPCVFVGYPSLKKGFKLLLL 425
           +L+ FGC    +   +   K  PR++  VF+GYP  +KG+K+  L
Sbjct: 748 HLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSL 792


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  104 bits (260), Expect(2) = 7e-27
 Identities = 50/96 (52%), Positives = 62/96 (64%)
 Frame = +2

Query: 32  TKLMNDHGILHQTSCSHRPQQNARVECKHRHILDVTRALKLQSGLSNEHWGDCVLAATYI 211
           TK    HGILHQTSC   PQ N  VE KHRHIL+V RAL+ Q+ L  E WG+CVL A Y+
Sbjct: 458 TKXFAKHGILHQTSCVGXPQXNGHVERKHRHILNVVRALRFQAHLPIEFWGECVLIARYL 517

Query: 212 INRIPSSVLQNISPYEMLFKESPAYDQLKVFWLLSY 319
           IN  PS  L   +PYE+L+ ++P+Y  +  F  L Y
Sbjct: 518 INXTPSVFLDGKTPYEILYGQAPSYKHIXTFGCLCY 553



 Score = 40.8 bits (94), Expect(2) = 7e-27
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +3

Query: 303 FGCLAMAAPPGISTDKLKPRALPCVFVGYPSLKKGFKLLLLNS 431
           FGCL  A       DK   R+  C+FVGYP  KKG++L  L S
Sbjct: 548 FGCLCYAHDQNRDKDKFASRSRKCIFVGYPFGKKGWRLYDLES 590


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 94.4 bits (233), Expect(2) = 9e-27
 Identities = 48/106 (45%), Positives = 67/106 (63%)
 Frame = +2

Query: 2   NAPEFSDKVCTKLMNDHGILHQTSCSHRPQQNARVECKHRHILDVTRALKLQSGLSNEHW 181
           NAPE + +    L    G  HQ SC++ PQQN+ VE KH+H+L+V RAL  QS +    W
Sbjct: 497 NAPELNFR---DLFAKTGTTHQFSCAYTPQQNSVVERKHQHLLNVARALMFQSKVPLIFW 553

Query: 182 GDCVLAATYIINRIPSSVLQNISPYEMLFKESPAYDQLKVFWLLSY 319
           G+CVL+A Y+INR P  +L N +P+  LFK+   Y+ +K F  L+Y
Sbjct: 554 GECVLSAAYLINRTPMVLLSNNTPFAALFKKKADYNIIKTFGCLAY 599



 Score = 50.8 bits (120), Expect(2) = 9e-27
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = +3

Query: 294 LKFFGCLAMAAPPGISTDKLKPRALPCVFVGYPSLKKGFKL 416
           +K FGCLA A+ P ++  K  PRA PCVF+G+P   KG++L
Sbjct: 591 IKTFGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRL 631


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  101 bits (251), Expect(2) = 9e-27
 Identities = 43/89 (48%), Positives = 65/89 (73%)
 Frame = +2

Query: 32  TKLMNDHGILHQTSCSHRPQQNARVECKHRHILDVTRALKLQSGLSNEHWGDCVLAATYI 211
           TK + + G++HQ SC++ PQQN+ VE KH+H+L++ R+L  QS +  ++W DCVL A Y+
Sbjct: 633 TKFVKEQGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYL 692

Query: 212 INRIPSSVLQNISPYEMLFKESPAYDQLK 298
           INR+PS +L N +P+E+L K+ P Y  LK
Sbjct: 693 INRLPSPLLDNKTPFELLLKKIPDYTLLK 721



 Score = 43.9 bits (102), Expect(2) = 9e-27
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = +3

Query: 309 CLAMAAPPGISTDKLKPRALPCVFVGYPSLKKGFKLLLLNSMS 437
           CL  A+      +K  PRA PCVF+GYPS  KG+K+L L S S
Sbjct: 723 CLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHS 765