BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035078
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   180   1e-43
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   178   7e-43
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   170   2e-40
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   167   9e-40
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   166   3e-39

>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  180 bits (457), Expect = 1e-43
 Identities = 88/192 (45%), Positives = 125/192 (65%)
 Frame = +2

Query: 2   IIPSRGIRQGDPLSPYLFIICAEGLSSLIRKYEANRWIRGIQVCCKAPIISHIFFADDSY 181
           I P RG+RQGDPLSPYLFI+CAEG+S+LI++ E N  + G++VC +AP +SH+ FADDS+
Sbjct: 219 IYPGRGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSF 278

Query: 182 FFCKADMNDALKVLELLKIYENASGQXXXXXXXXXXXXXXXXQYNRETVCQILQMSEADE 361
            F +A+ N+   + ++L  Y NAS Q                   + T+  +L +SE   
Sbjct: 279 LFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIG 338

Query: 362 HSKYLGLPNILGRKKSAILGYLKDKVHSRIRSWESKYVSQAGRETLVKTVVQTLPTYAMS 541
             KYLGLP+++GR K +I  Y+KD++ +RI    SK +SQAG+E L+K+V Q +P+Y MS
Sbjct: 339 IRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMS 398

Query: 542 VFLLPLEITKDI 577
           VFLLP  I  DI
Sbjct: 399 VFLLPHSIADDI 410


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  178 bits (451), Expect = 7e-43
 Identities = 89/192 (46%), Positives = 126/192 (65%)
 Frame = +2

Query: 2    IIPSRGIRQGDPLSPYLFIICAEGLSSLIRKYEANRWIRGIQVCCKAPIISHIFFADDSY 181
            IIP RG+RQGDPLSPYLFIICAEGLSSLIR+ E +  I G ++C  APIISH+ FADD +
Sbjct: 1051 IIPGRGLRQGDPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCF 1110

Query: 182  FFCKADMNDALKVLELLKIYENASGQXXXXXXXXXXXXXXXXQYNRETVCQILQMSEADE 361
             F KA    A  +  +L++YE++SGQ                   + ++ QIL + +   
Sbjct: 1111 LFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMG 1170

Query: 362  HSKYLGLPNILGRKKSAILGYLKDKVHSRIRSWESKYVSQAGRETLVKTVVQTLPTYAMS 541
              KYLG+P+++GR + +   ++K++V  +I SW SK +SQAGRETL+K+V+Q++P Y MS
Sbjct: 1171 TGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLIKSVLQSIPFYIMS 1230

Query: 542  VFLLPLEITKDI 577
            +F +P  I  DI
Sbjct: 1231 IFAIPKSIIVDI 1242


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  170 bits (430), Expect = 2e-40
 Identities = 77/190 (40%), Positives = 116/190 (61%)
 Frame = +2

Query: 8    PSRGIRQGDPLSPYLFIICAEGLSSLIRKYEANRWIRGIQVCCKAPIISHIFFADDSYFF 187
            PSRG+RQGDP+SPYLF++CA+  S+L+ K  + + I G Q+C  AP++SH+FFADDS  F
Sbjct: 632  PSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILF 691

Query: 188  CKADMNDALKVLELLKIYENASGQXXXXXXXXXXXXXXXXQYNRETVCQILQMSEADEHS 367
             KA + +   V +++  YE ASGQ                +  R  +  +L + E D   
Sbjct: 692  TKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQE 751

Query: 368  KYLGLPNILGRKKSAILGYLKDKVHSRIRSWESKYVSQAGRETLVKTVVQTLPTYAMSVF 547
            KYLGLP I+GR K      +K+++  +++ W+ K +S+ G+E L+K+V Q +PTY MSVF
Sbjct: 752  KYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVF 811

Query: 548  LLPLEITKDI 577
             LP  +  +I
Sbjct: 812  SLPSGLIDEI 821


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  167 bits (424), Expect = 9e-40
 Identities = 82/182 (45%), Positives = 117/182 (64%)
 Frame = +2

Query: 2   IIPSRGIRQGDPLSPYLFIICAEGLSSLIRKYEANRWIRGIQVCCKAPIISHIFFADDSY 181
           I P RG+RQGDPLSPYLFIICAEGLS++++K E    I GI++C  AP ++H+FFADDS 
Sbjct: 208 IFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSL 267

Query: 182 FFCKADMNDALKVLELLKIYENASGQXXXXXXXXXXXXXXXXQYNRETVCQILQMSEADE 361
              +A  +DAL++  +L +YE ASGQ                Q++R  +   L +++   
Sbjct: 268 ILMRARASDALELRRILDVYEKASGQVINKEKSSMMFSPNTGQHDRSLMRSNLSITDEAS 327

Query: 362 HSKYLGLPNILGRKKSAILGYLKDKVHSRIRSWESKYVSQAGRETLVKTVVQTLPTYAMS 541
             KYLGLP  +G+ +     Y+K K+ SRI+ W+ K +S+AG+E L+K V Q++PTYAMS
Sbjct: 328 TEKYLGLPVNIGKSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMS 387

Query: 542 VF 547
            F
Sbjct: 388 CF 389


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  166 bits (420), Expect = 3e-39
 Identities = 83/185 (44%), Positives = 110/185 (59%)
 Frame = +2

Query: 2    IIPSRGIRQGDPLSPYLFIICAEGLSSLIRKYEANRWIRGIQVCCKAPIISHIFFADDSY 181
            I PSRG+RQGDP+SPYLF+I AEGLS+LIRK E  + I G+ +   AP +SH+F+ADDS 
Sbjct: 915  IKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSL 974

Query: 182  FFCKADMNDALKVLELLKIYENASGQXXXXXXXXXXXXXXXXQYNRETVCQILQMSEADE 361
             FC A + D + +  +   YE ASGQ                   +E    IL M     
Sbjct: 975  LFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPC 1034

Query: 362  HSKYLGLPNILGRKKSAILGYLKDKVHSRIRSWESKYVSQAGRETLVKTVVQTLPTYAMS 541
            H +YLGLP + G+ K  +   L D+V +R+  WE K +S+AG+E L+KTV Q +P Y MS
Sbjct: 1035 HERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMS 1094

Query: 542  VFLLP 556
            VF LP
Sbjct: 1095 VFQLP 1099