BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035077
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   221   2e-55
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   210   3e-52
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   208   9e-52
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   201   1e-49
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   201   2e-49

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  221 bits (562), Expect = 2e-55
 Identities = 111/254 (43%), Positives = 155/254 (61%), Gaps = 5/254 (1%)
 Frame = -1

Query: 747  QALPTYAMSVFLLPLEITKDIERSLSKFWWRSPQENKAKISWMSWDRLTKHKNAGGLGFR 568
            Q++PTY M + LLP ++ +DIE  ++ F+W S  + ++ I WMSW ++ K K  GGLGFR
Sbjct: 266  QSIPTYVMQLLLLPKDLCRDIESMMNGFFWDSNPQCRS-IRWMSWGKMCKQKKDGGLGFR 324

Query: 567  HFRDFNLAMLGKQGWRFLSNPDSLVTKVYKARYFANSDFLNATLGKNPSFVWRSILEAKN 388
               DFNLA+L KQGWRFL NPDSLVT++++ARYF NS FLNA LG NPS++WRSIL A+ 
Sbjct: 325  KLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQG 384

Query: 387  LIVEGSRWRVGTGEEITIYGQPWLSEECNPYITTIS-QSLDDKKVASLLCTDTKEWDVAV 211
            L+  G  W + +G ++ ++G  WL +  N  I T      D  KV  L+      W    
Sbjct: 385  LLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELITEGL--WREDF 442

Query: 210  VRDVFNEKDQQCILSIPLPTDNVEDTMFWKLEATGNYSVKSAYKWLQSQRGAWRI----E 43
            +RD F  +D   ILSIPLP  + ED + W  +A G Y+ +S Y  L+  R +  +     
Sbjct: 443  IRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDV 502

Query: 42   DDDSIWRLLWKITA 1
            D + +W  LWK+TA
Sbjct: 503  DSNFVWAQLWKVTA 516


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  210 bits (534), Expect = 3e-52
 Identities = 111/253 (43%), Positives = 151/253 (59%), Gaps = 5/253 (1%)
 Frame = -1

Query: 747  QALPTYAMSVFLLPLEITKDIERSLSKFWWRSPQENKAKISWMSWDRLTKHKNAGGLGFR 568
            Q++PTY M + LLP ++ +DIE  ++ F+W S  + ++ I WMSW ++ K K  GGLGFR
Sbjct: 1353 QSIPTYVMQLLLLPKDLCRDIESMMNXFFWDSNPQXRS-IRWMSWXKMCKQKKDGGLGFR 1411

Query: 567  HFRDFNLAMLGKQGWRFLSNPDSLVTKVYKARYFANSDFLNATLGKNPSFVWRSILEAKN 388
               DFNLA+L KQG RFL N DSLVT +++ARYF NS FLNA LG NPS++WRSIL A++
Sbjct: 1412 KLEDFNLALLAKQGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQD 1471

Query: 387  LIVEGSRWRVGTGEEITIYGQPWLSEECNPYITTIS-QSLDDKKVASLLCTDTKEWDVAV 211
            L+  G  W + +G ++ ++G  WL    N  I T      D  KV  L+      W    
Sbjct: 1472 LLKMGCYWSIASGTKVQVWGDSWLPNSSNRLIITPHVADFDGIKVDELITKGL--WHEDF 1529

Query: 210  VRDVFNEKDQQCILSIPLPTDNVEDTMFWKLEATGNYSVKSAYKWLQ--SQRGAWRIEDD 37
            +RD F  +D   ILSIPLP  + ED + W  +A G Y+ +S Y  L+   Q  A    D 
Sbjct: 1530 IRDKFMGRDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAALVASDV 1589

Query: 36   DS--IWRLLWKIT 4
            DS  +W  LWK+T
Sbjct: 1590 DSNFVWAQLWKVT 1602


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 573

 Score =  208 bits (530), Expect = 9e-52
 Identities = 96/224 (42%), Positives = 139/224 (62%), Gaps = 1/224 (0%)
 Frame = -1

Query: 747  QALPTYAMSVFLLPLEITKDIERSLSKFWWRSPQENKAKISWMSWDRLTKHKNAGGLGFR 568
            QA+P+Y M  FL+P  + +++ER ++ F+W S +  +  I+WM WD LT HK+ GGLGFR
Sbjct: 329  QAIPSYCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINWMRWDFLTLHKSLGGLGFR 388

Query: 567  HFRDFNLAMLGKQGWRFLSNPDSLVTKVYKARYFANSDFLNATLGKNPSFVWRSILEAKN 388
            +   FNL+MLGKQGW+ LS+  SL T++ KA+YF   DFL+ATLG NPS+ WRS+   ++
Sbjct: 389  NLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLDATLGHNPSYTWRSLWSTQS 448

Query: 387  LIVEGSRWRVGTGEEITIYGQPWLSEECN-PYITTISQSLDDKKVASLLCTDTKEWDVAV 211
            L+  G RW++G G +I ++  PW+    +    T+      D  V SLL  D   WD  +
Sbjct: 449  LLTLGHRWKIGDGSKINVWSMPWIRNLLSLKPSTSPPLHQHDLTVNSLLSADFNSWDTTL 508

Query: 210  VRDVFNEKDQQCILSIPLPTDNVEDTMFWKLEATGNYSVKSAYK 79
            V+ +FN+ +   ILS PL   +  D   WK    G Y+VKSAY+
Sbjct: 509  VQSLFNDAEAAAILSTPLFARSGSDVRIWKATVDGTYTVKSAYR 552


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  201 bits (511), Expect = 1e-49
 Identities = 98/248 (39%), Positives = 157/248 (63%)
 Frame = -1

Query: 750  VQALPTYAMSVFLLPLEITKDIERSLSKFWWRSPQENKAKISWMSWDRLTKHKNAGGLGF 571
            +QALPTY M V+ LP+ + ++I  ++++FWW    + + K+ W+SW+++ K K  GG+GF
Sbjct: 804  IQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDER-KMHWLSWEKMCKPKCMGGMGF 862

Query: 570  RHFRDFNLAMLGKQGWRFLSNPDSLVTKVYKARYFANSDFLNATLGKNPSFVWRSILEAK 391
            +    FN A+LGKQ WR L N +SL+++V  A+Y+ + D   A LG + S+ WRSI  AK
Sbjct: 863  KDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHSYSWRSIWGAK 922

Query: 390  NLIVEGSRWRVGTGEEITIYGQPWLSEECNPYITTISQSLDDKKVASLLCTDTKEWDVAV 211
            +L++EG  WRVG G +I I+  PW+ +E   +I + ++    + V  L+  + KEW+V +
Sbjct: 923  SLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFIKS-ARVEGLEVVGDLMDVERKEWNVEL 981

Query: 210  VRDVFNEKDQQCILSIPLPTDNVEDTMFWKLEATGNYSVKSAYKWLQSQRGAWRIEDDDS 31
            +   FNE+DQQCIL+IPL T  ++D + W     G YSVK+AY  +  + G   ++D   
Sbjct: 982  IERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAY--MLGKGG--NLDDFHR 1037

Query: 30   IWRLLWKI 7
            +W +LW +
Sbjct: 1038 VWNILWSL 1045


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 653

 Score =  201 bits (510), Expect = 2e-49
 Identities = 102/247 (41%), Positives = 145/247 (58%), Gaps = 4/247 (1%)
 Frame = -1

Query: 747  QALPTYAMSVFLLPLEITKDIERSLSKFWWRSPQENKAKISWMSWDRLTKHKNAGGLGFR 568
            QA+P+Y MSVFLLP  I  DIE+ L+ FWW    E +  I WMSW+RLT  K  GG+GFR
Sbjct: 390  QAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFR 449

Query: 567  HFRDFNLAMLGKQGWRFLSNPDSLVTKVYKARYFANSDFLNATLGKNPSFVWRSILEAKN 388
            H   F+LAM GKQ W FL+NPD++V++++KA+YF N +FL A+LG NPS+VWRSI  ++ 
Sbjct: 450  HIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNENFLGASLGHNPSYVWRSIWSSRI 509

Query: 387  LIVEGSRWRVGTGEEITIYGQPWLSEECNPYITTISQSLDDKKVASLLCTDTKEWDVAVV 208
             +  G +WR+G G                   TT +       V+ L+   T+ W+  ++
Sbjct: 510  FLKTGYQWRIGDGS------------------TTAT-------VSHLIDAQTRSWNEPLI 544

Query: 207  RDVFNEKDQQCILSIPLPTDNVEDTMFWKLEATGNYSVKSAYKW---LQSQRGAWRIEDD 37
            R+ FN +D   IL IPL      D + W+ +  G YSVK+AY+    +   R  W++E D
Sbjct: 545  RNNFNLRDVDEILKIPLLHCEQNDAIIWRFDKKGVYSVKNAYRVCVDVLINRDEWKVEGD 604

Query: 36   -DSIWRL 19
             + +W L
Sbjct: 605  RNKLWSL 611