BLASTX nr result

ID: Bupleurum21_contig00035056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035056
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arab...    99   4e-19
ref|XP_002299664.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|NP_001117422.4| uncharacterized protein [Arabidopsis thalian...    94   1e-17
ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arab...    94   1e-17

>ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|222859068|gb|EEE96615.1|
           predicted protein [Populus trichocarpa]
          Length = 1497

 Score =  112 bits (281), Expect = 2e-23
 Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = +3

Query: 6   QVAGTYIATLHYQMAYRVQNH*FDLSLPRDTDEALFLEINAQSSSSCIHVSKQISKNELI 185
           QV  TY ATLHYQMAYRVQNH FDL LP  T++AL + ++    ++C HV +QI K +L 
Sbjct: 220 QVLDTYQATLHYQMAYRVQNHAFDLVLPV-TNDALLITVDTNQRATCTHVPRQIPKEDLQ 278

Query: 186 KLLPESCITHYKKIQRDNSLIHFFKSSFFRKKDGEVEIVFKKDDRDES-TSVFSSEINMI 362
           KLLP S IT+YKK+ + +  I   +  F +K DG VEI+FKK +   S   +FSS I+M+
Sbjct: 279 KLLPSSWITNYKKLHQSSIPIQSTEPEFTKKVDGTVEIIFKKGESSSSPPGIFSSSISMV 338

Query: 363 E 365
           +
Sbjct: 339 Q 339


>ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arabidopsis lyrata subsp.
           lyrata] gi|297339666|gb|EFH70083.1| hypothetical protein
           ARALYDRAFT_891051 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/86 (55%), Positives = 63/86 (73%)
 Frame = +3

Query: 3   PQVAGTYIATLHYQMAYRVQNH*FDLSLPRDTDEALFLEINAQSSSSCIHVSKQISKNEL 182
           PQV  TY ATLH+QMAYRVQNH  DLSLP DT++AL +++ +Q S SCIH+ +QI + EL
Sbjct: 196 PQVRNTYAATLHHQMAYRVQNHSMDLSLPSDTEDALLIQLESQYSPSCIHIPRQIPREEL 255

Query: 183 IKLLPESCITHYKKIQRDNSLIHFFK 260
           +KLLPES +T  +     NS+I  F+
Sbjct: 256 VKLLPESWVTTMR-----NSMIEVFQ 276


>ref|XP_002299664.1| predicted protein [Populus trichocarpa] gi|222846922|gb|EEE84469.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = +3

Query: 6   QVAGTYIATLHYQMAYRVQNH*FDLSLPRDTDEALFLEINAQSSSSCIHVSKQISKNELI 185
           QV   Y A LHYQ+AYRVQNH FDL LP  T++ L + ++    ++  HV +QI K++L 
Sbjct: 123 QVLDAYQAVLHYQLAYRVQNHAFDLVLPV-TNDVLLITVDINQRATYTHVPRQIPKSDLQ 181

Query: 186 KLLPESCITHYKKIQRDNSLIHFFKSSFFRKKDGEVEIVFKKDDRDES-TSVFSSEINMI 362
           KLLP S IT+Y+ + + +  I   +  F +K DG +EI+FKK D   S   +FSS I+M+
Sbjct: 182 KLLPFSWITNYENLHQSSVPIQSTEPKFTKKVDGTIEIIFKKGDSSTSPPGIFSSSISMM 241

Query: 363 E 365
           +
Sbjct: 242 Q 242


>ref|NP_001117422.4| uncharacterized protein [Arabidopsis thaliana]
           gi|332193769|gb|AEE31890.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 414

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/98 (42%), Positives = 67/98 (68%)
 Frame = +3

Query: 84  LPRDTDEALFLEINAQSSSSCIHVSKQISKNELIKLLPESCITHYKKIQRDNSLIHFFKS 263
           LPRDT++AL +++ +Q S SC+H+ +QI ++EL+KL PES +T+Y+K+   ++LI    S
Sbjct: 89  LPRDTEDALLVQLESQHSPSCVHILRQIPRDELVKLFPESWVTNYEKLHDRSTLIQSMDS 148

Query: 264 SFFRKKDGEVEIVFKKDDRDESTSVFSSEINMIEDLPN 377
           S  R+KDG +EI FK+ +     + F +EIN I  + N
Sbjct: 149 SIHRRKDGAMEIAFKQQEEKPRPAAFYTEINTISPIDN 186


>ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arabidopsis lyrata subsp.
           lyrata] gi|297336946|gb|EFH67363.1| hypothetical protein
           ARALYDRAFT_336508 [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 42/67 (62%), Positives = 54/67 (80%)
 Frame = +3

Query: 3   PQVAGTYIATLHYQMAYRVQNH*FDLSLPRDTDEALFLEINAQSSSSCIHVSKQISKNEL 182
           PQ+  TY ATLH+QMAYR QN+  DLSLPRDT++AL +++ +Q S SCIH+ +QI K EL
Sbjct: 140 PQIGNTYAATLHHQMAYRDQNYAMDLSLPRDTEDALLIQLESQHSPSCIHIPRQIPKEEL 199

Query: 183 IKLLPES 203
           +KLLPES
Sbjct: 200 VKLLPES 206


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