BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035050
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]   161   4e-38
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_002530609.1| pentatricopeptide repeat-containing protein,...   154   9e-36
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ...   138   5e-31

>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  161 bits (408), Expect = 4e-38
 Identities = 74/117 (63%), Positives = 97/117 (82%)
 Frame = +3

Query: 3   SHHYRDALKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPH 182
           SHH   +++LF +IHSS +L+PDH++LS+ LTACANLR + +GNQLH  ++++GLK Y H
Sbjct: 30  SHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTH 89

Query: 183 VSNTLLSMYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDMP 353
           V NTLLS YAKS++LVSV+RVF EI+ PDVYSWTTLLSACTKLG++ YAC +F+  P
Sbjct: 90  VGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTP 146



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/109 (33%), Positives = 61/109 (55%)
 Frame = +3

Query: 24  LKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPHVSNTLLS 203
           L+ F E+  S  L+P+ Y+LS  L+ CA++     G Q+HG  +RSG+ +   + N L++
Sbjct: 468 LEQFYELLMST-LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALIT 526

Query: 204 MYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDM 350
           MYAK  +L    R+F  +   D+ SW  ++SA  + G+ + A   F  M
Sbjct: 527 MYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAM 575


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  161 bits (408), Expect = 4e-38
 Identities = 74/117 (63%), Positives = 97/117 (82%)
 Frame = +3

Query: 3   SHHYRDALKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPH 182
           SHH   +++LF +IHSS +L+PDH++LS+ LTACANLR + +GNQLH  ++++GLK Y H
Sbjct: 36  SHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTH 95

Query: 183 VSNTLLSMYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDMP 353
           V NTLLS YAKS++LVSV+RVF EI+ PDVYSWTTLLSACTKLG++ YAC +F+  P
Sbjct: 96  VGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTP 152



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/109 (33%), Positives = 61/109 (55%)
 Frame = +3

Query: 24  LKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPHVSNTLLS 203
           L+ F E+  S  L+P+ Y+LS  L+ CA++     G Q+HG  +RSG+ +   + N L++
Sbjct: 429 LEQFYELLMST-LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALIT 487

Query: 204 MYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDM 350
           MYAK  +L    R+F  +   D+ SW  ++SA  + G+ + A   F  M
Sbjct: 488 MYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAM 536


>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/123 (63%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   SHHYRDALKLFQEIHSS--YHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTY 176
           S  Y D+L+LF +IHSS  ++++PDHY+LST L  CAN RD   G+QLHG A+RSGLK Y
Sbjct: 35  SSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRDIAFGSQLHGYAIRSGLKFY 94

Query: 177 PHVSNTLLSMYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDMPH 356
           PHV+NT+LS+YAK E+ VS+KR F EI+ PDVYSWTTLLSACTK+G +EYA  +FD MP 
Sbjct: 95  PHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTKMGHIEYASEMFDIMPK 154

Query: 357 KNV 365
            NV
Sbjct: 155 GNV 157



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = +3

Query: 21  ALKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPHVSNTLL 200
           AL+ F ++  S  L+P  ++LS  L+ CAN+     G Q+HG  +RSG  +   + N L+
Sbjct: 474 ALEHFSKLIMS-KLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLI 532

Query: 201 SMYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVF---DDMP 353
           +MY+K   L    R F  +   D+ SW +++SA  + G+ + A   F    DMP
Sbjct: 533 TMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMP 586


>ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529857|gb|EEF31789.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/122 (61%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   SHHYRDALKLFQEIHSSYH-LRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYP 179
           S  Y+DAL LF +I S Y+ L+PDHY+LST LTACANL D+  GN+LH  A++S LKTY 
Sbjct: 42  STQYKDALHLFDKIRSLYYYLKPDHYTLSTTLTACANLCDTTFGNKLHAYAIKSSLKTYT 101

Query: 180 HVSNTLLSMYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDMPHK 359
           HV+NTLLS+YAK++ + SVK VFGE + PDVYS+ TL+SAC KLG V+YAC +FD MP +
Sbjct: 102 HVANTLLSLYAKAKEIDSVKWVFGETENPDVYSYATLVSACAKLGHVDYACVLFDVMPQR 161

Query: 360 NV 365
           +V
Sbjct: 162 DV 163



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/113 (30%), Positives = 57/113 (50%)
 Frame = +3

Query: 24  LKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPHVSNTLLS 203
           L+ F E+  S   + + Y+L+  L+ CA++     G Q+HG  +RSG  +   + N L++
Sbjct: 481 LEKFSELQMS-EFKSNEYTLNIILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLIT 539

Query: 204 MYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDMPHKN 362
            YAK   +    RVF  +   D  SW  L+SA  + G+   A   F+ M H +
Sbjct: 540 FYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQHGKGNEAIYQFEAMQHSS 592


>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321831|gb|EFH52252.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 731

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/116 (59%), Positives = 86/116 (74%)
 Frame = +3

Query: 15  RDALKLFQEIHSSYHLRPDHYSLSTALTACANLRDSYAGNQLHGNAVRSGLKTYPHVSNT 194
           R+ALKLF ++H    LRPD YS+S A+TA  +LRD+  G Q+H  A+RSGL  + HVSNT
Sbjct: 32  RNALKLFADVHRCITLRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSGLLCHSHVSNT 91

Query: 195 LLSMYAKSENLVSVKRVFGEIKTPDVYSWTTLLSACTKLGEVEYACGVFDDMPHKN 362
           LLS+YA+  NL S+KR F EI  PDVYSWTTLLSA  KLG++EYA  VFD MP ++
Sbjct: 92  LLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERD 147