BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035047
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   250   3e-64
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   244   1e-62
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   236   5e-60
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   234   2e-59
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   232   6e-59

>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  250 bits (638), Expect = 3e-64
 Identities = 133/256 (51%), Positives = 178/256 (69%), Gaps = 2/256 (0%)
 Frame = +2

Query: 2   IHAAENYFNALPESAKDKSTYGALLYCYCRDKLTDKAQALFEKMDKMQFVC-SVAFNNLL 178
           I AAENYF+ L  S ++ ST+GALL CYCR+ +++KA  LFEKMDKM+F+  S+ FNNL+
Sbjct: 93  IAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALTLFEKMDKMKFLLTSLPFNNLI 152

Query: 179 SLYMTLNLPDKVPPLVQEMKNRNIPLNALTYNIWITSYSRLQDIDGVEKVFEEMRLTNEE 358
           SL++ L+ P+KV P+VQEMK + +     TYN+W+ SY  L D +GVE+V +EM++  ++
Sbjct: 153 SLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYGCLNDFEGVERVLDEMKMDGQK 212

Query: 359 VQYEWTTYSNLAVAYVKAGQYEKAESILKILEEEIGKMGNRCQREPFHYLISLYAGTSNL 538
             + WTTY+NLA  YVKAG ++KAES LK +EE+I     R  RE +H+LI+LYAGTSNL
Sbjct: 213 -NFSWTTYTNLATIYVKAGHFDKAESALKKVEEQI----ERDYREAYHFLITLYAGTSNL 267

Query: 539 AQVHNIWKRLKSTFEITSN-DTLRMLSALAKLDDVKGFKKIFDEWESSQSTSARYDKRLP 715
            +V+ +W  LKS F  T+N   L ML  LAKL DV+G  K F EWESS  +   YD RL 
Sbjct: 268 GEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESSCHS---YDMRLA 324

Query: 716 KHAIRFYQKHDMIDEA 763
             AIR   +HDM +EA
Sbjct: 325 NVAIRACLEHDMYEEA 340


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  244 bits (623), Expect = 1e-62
 Identities = 134/266 (50%), Positives = 176/266 (66%), Gaps = 12/266 (4%)
 Frame = +2

Query: 2   IHAAENYFNALPESAKDKSTYGALLYCYCRDKLTDKAQALFEKMDKMQFVC-SVAFNNLL 178
           I AAENYF+ LP S ++  TY  LL CYC++ +++KA  LFEKMDKM+ +  S+ FNNL+
Sbjct: 82  IAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALTLFEKMDKMKLLSTSMPFNNLM 141

Query: 179 SLYMTLNLPDKVPPLVQEMKNRNIPLNALTYNIWITSYSRLQDIDGVEKVFEEMRLTNEE 358
           +L+M L  P+KV  +VQEMK R +     TYNIW+ SY  L D +GV++V +EM+   +E
Sbjct: 142 TLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYGCLNDFEGVQRVLDEMKTDGKE 201

Query: 359 VQYEWTTYSNLAVAYVKAGQYEKAESILKILEEEIGKMGNRC----------QREPFHYL 508
             + WTTYSNLA  YVKAG ++KAES L+ LEE+I + G  C           RE +H+L
Sbjct: 202 -NFSWTTYSNLATIYVKAGLFDKAESALRKLEEQI-ECGRDCDFQKKRRHDADREAYHFL 259

Query: 509 ISLYAGTSNLAQVHNIWKRLKSTFEITSN-DTLRMLSALAKLDDVKGFKKIFDEWESSQS 685
           ISLYAGTSNL++VH +W  LKS+F  T+N   L +L ALAKL DV+G  K F EWESS  
Sbjct: 260 ISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGILKCFKEWESSCH 319

Query: 686 TSARYDKRLPKHAIRFYQKHDMIDEA 763
           +   YD  L   AIR   +HDM +EA
Sbjct: 320 S---YDMGLANVAIRACLEHDMYEEA 342


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  236 bits (601), Expect = 5e-60
 Identities = 130/257 (50%), Positives = 170/257 (66%), Gaps = 3/257 (1%)
 Frame = +2

Query: 2   IHAAENYFNALPESAKDKST-YGALLYCYCRDKLTDKAQALFEKMDKMQFV-CSVAFNNL 175
           I AAE+YFN L  SAK+  T YGALL CYC++ ++DKA ALF++MD+ +F+  S+ FNNL
Sbjct: 121 IAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFLYSSLPFNNL 180

Query: 176 LSLYMTLNLPDKVPPLVQEMKNRNIPLNALTYNIWITSYSRLQDIDGVEKVFEEMRLTNE 355
           +S+YM L  P+KVPPLV EMK R +   + TYNIW+ SY  L D  GV++V  E+     
Sbjct: 181 MSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRVLREIVNDGG 240

Query: 356 EVQYEWTTYSNLAVAYVKAGQYEKAESILKILEEEIGKMGNRCQREPFHYLISLYAGTSN 535
           +   +WTTYSNLA  Y+KAG +EKAES LK LE  +G       RE +H+LIS+YAGT N
Sbjct: 241 KDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMGFR----NREAYHFLISIYAGTGN 296

Query: 536 LAQVHNIWKRLKSTFEITSN-DTLRMLSALAKLDDVKGFKKIFDEWESSQSTSARYDKRL 712
             +V+ +W  LKS+F + +N   L ML ALAKL DV+G  K F EWES       YD R+
Sbjct: 297 SNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESG---CTNYDMRI 353

Query: 713 PKHAIRFYQKHDMIDEA 763
              AIR + +HDM +EA
Sbjct: 354 ANVAIRVFLQHDMYEEA 370


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  234 bits (597), Expect = 2e-59
 Identities = 121/255 (47%), Positives = 172/255 (67%), Gaps = 1/255 (0%)
 Frame = +2

Query: 2   IHAAENYFNALPESAKDKSTYGALLYCYCRDKLTDKAQALFEKMDKMQFVCSVAFNNLLS 181
           + AAE YF  LP SAK++ TYGALL CYC++ + +KA  LF+KMD+++   S++FNNL++
Sbjct: 92  VTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALTLFKKMDELKISTSLSFNNLMT 151

Query: 182 LYMTLNLPDKVPPLVQEMKNRNIPLNALTYNIWITSYSRLQDIDGVEKVFEEMRLTNEEV 361
           +YM ++ P+KVPPL+ EMK R   L   TYN+W+ S + L DI  VE++ EEM++ +   
Sbjct: 152 MYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKVEEILEEMKMEDRN- 210

Query: 362 QYEWTTYSNLAVAYVKAGQYEKAESILKILEEEIGKMGNRCQREPFHYLISLYAGTSNLA 541
           +++WTTYSNLA  YVKAGQ+EKAE  LK LEEE+    ++  R  +H LISLYA TSNL+
Sbjct: 211 KFDWTTYSNLASFYVKAGQFEKAELALKKLEEEM--KSDKNDRLVYHCLISLYASTSNLS 268

Query: 542 QVHNIWKRLKSTFEITSN-DTLRMLSALAKLDDVKGFKKIFDEWESSQSTSARYDKRLPK 718
           +V+ IW  LKS +   +N   L ML AL KL D++G K+ + EWES+      +D R+  
Sbjct: 269 EVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWESN---CRNFDLRIVN 325

Query: 719 HAIRFYQKHDMIDEA 763
             I  Y + DM ++A
Sbjct: 326 DIIGAYLQQDMYEDA 340


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  232 bits (592), Expect = 6e-59
 Identities = 130/253 (51%), Positives = 168/253 (66%), Gaps = 2/253 (0%)
 Frame = +2

Query: 11  AENYFNALPESAKDKSTYGALLYCYCRDKLTDKAQALFEKMDKMQFVC-SVAFNNLLSLY 187
           AE YFN L  SAK+  TYG LL CYC++K+ +KA ALFEKMD++ F   S+ FNNL+SL+
Sbjct: 130 AEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLH 189

Query: 188 MTLNLPDKVPPLVQEMKNRNIPLNALTYNIWITSYSRLQDIDGVEKVFEEMRLTNEEVQY 367
           M L  P+ VPPLV EMK R+I  +  TYNI + SY+RL DI+G E+V EE++  NE+ + 
Sbjct: 190 MRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENED-KL 248

Query: 368 EWTTYSNLAVAYVKAGQYEKAESILKILEEEIGKMGNRCQREPFHYLISLYAGTSNLAQV 547
            WTTYSNLA  YV A  +EKAE  LK LEEE+G       R  +H+LISLYAG +NL++V
Sbjct: 249 SWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFH----DRLAYHFLISLYAGINNLSEV 304

Query: 548 HNIWKRLKSTFEITSN-DTLRMLSALAKLDDVKGFKKIFDEWESSQSTSARYDKRLPKHA 724
           + +W  LKS F  T+N     ML ALA L+DV G K  F+EW+SS      +D RL   A
Sbjct: 305 NRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSS---CFSFDVRLANVA 361

Query: 725 IRFYQKHDMIDEA 763
           +R +   DMI +A
Sbjct: 362 VRAFLGWDMIKDA 374