BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035023
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48034.1| unknown [Lotus japonicus]                              228   5e-58
gb|AFK42721.1| unknown [Lotus japonicus]                              224   4e-57
sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox...   224   7e-57
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   224   7e-57
emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subu...   223   2e-56

>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  228 bits (580), Expect = 5e-58
 Identities = 107/129 (82%), Positives = 113/129 (87%), Gaps = 2/129 (1%)
 Frame = -3

Query: 381 TAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVWPPINMK 208
           +AVTT+N ASPAQA  VAPFTGLKSMAGFPV K NNDITSIA+NG RV CMQVWPPI  K
Sbjct: 9   SAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQVWPPIGKK 68

Query: 207 KFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYQDGRYWVMW 28
           KFETLSYLPPLTTEQL KEV+YLLR GWVPCLEFE E GFVYRE+H SPGY DGRYW MW
Sbjct: 69  KFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMW 128

Query: 27  KLPMFGCTD 1
           KLPMFGC+D
Sbjct: 129 KLPMFGCSD 137


>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score =  224 bits (572), Expect = 4e-57
 Identities = 106/128 (82%), Positives = 110/128 (85%), Gaps = 2/128 (1%)
 Frame = -3

Query: 378 AVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVWPPINMKK 205
           A TT+  ASPAQA  VAPFTGLKSMAGFPV K NNDITSIASNG RV CMQVWPPI  KK
Sbjct: 11  AATTIKGASPAQASMVAPFTGLKSMAGFPVRKANNDITSIASNGGRVQCMQVWPPIGKKK 70

Query: 204 FETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYQDGRYWVMWK 25
           FETLSYLPPLTTEQL KEV+YLLR GWVPCLEFE E GFVYRE+H SPGY DGRYW MWK
Sbjct: 71  FETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMWK 130

Query: 24  LPMFGCTD 1
           LPMFGC+D
Sbjct: 131 LPMFGCSD 138


>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|3044116|gb|AAC13293.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Medicago sativa]
          Length = 180

 Score =  224 bits (570), Expect = 7e-57
 Identities = 107/129 (82%), Positives = 114/129 (88%), Gaps = 3/129 (2%)
 Frame = -3

Query: 378 AVTTVNRASPAQA--VAPFTGLKSMAGFPVTKK-NNDITSIASNGSRVNCMQVWPPINMK 208
           AVTTVNRAS AQA  VAPFTGLKS AGFPVTKK NNDITSIASNG RVNCMQVWPP+  K
Sbjct: 8   AVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKK 67

Query: 207 KFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYQDGRYWVMW 28
           KFETLSYLPPLT EQLAKEV+YL+R GW+PCLEFELE GFVYRE+H SPGY DGRYW MW
Sbjct: 68  KFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMW 127

Query: 27  KLPMFGCTD 1
           +LP+FG TD
Sbjct: 128 RLPLFGATD 136


>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
           [Corchorus olitorius]
          Length = 183

 Score =  224 bits (570), Expect = 7e-57
 Identities = 106/130 (81%), Positives = 112/130 (86%), Gaps = 3/130 (2%)
 Frame = -3

Query: 381 TAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNN-DITSIASNGSRVNCMQVWPPINM 211
           ++ T VNRASPAQA  VAPFTGLKS + FP T+KNN DITSIASNG RV CMQVWPP+  
Sbjct: 7   SSATVVNRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGK 66

Query: 210 KKFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYQDGRYWVM 31
           KKFETLSYLP LT  QLAKEVDYLLRSGW+PCLEFELEHGFVYREHH SPGY DGRYW M
Sbjct: 67  KKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTM 126

Query: 30  WKLPMFGCTD 1
           WKLPMFGCTD
Sbjct: 127 WKLPMFGCTD 136


>emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subunit [Cicer
           arietinum]
          Length = 181

 Score =  223 bits (567), Expect = 2e-56
 Identities = 105/129 (81%), Positives = 113/129 (87%), Gaps = 2/129 (1%)
 Frame = -3

Query: 381 TAVTTVNRAS--PAQAVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVWPPINMK 208
           +AVTTV RAS  P+ AVAPF GLKSMAGFPV K NNDITSIASNG RV+CMQVWPPI  K
Sbjct: 9   SAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPPIGKK 68

Query: 207 KFETLSYLPPLTTEQLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYQDGRYWVMW 28
           KFETLSYLPPLT EQL KEV+YLLR GWVPCLEFELE GFVYREH++SPGY DGRYW MW
Sbjct: 69  KFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMW 128

Query: 27  KLPMFGCTD 1
           KLP+FGCT+
Sbjct: 129 KLPLFGCTE 137