BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035020
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-102
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-101
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   374   e-101
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ...   342   8e-92
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]   342   8e-92

>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  375 bits (963), Expect = e-102
 Identities = 178/282 (63%), Positives = 229/282 (81%)
 Frame = +1

Query: 1   VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
           VN YA+LG++SLSR TF  I +K+V+ WNSMIS+YVRNG +R+A++  Y++L+ +  + D
Sbjct: 115 VNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQAD 174

Query: 181 FYTFPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMT 360
           FYTFP VLKAC   +DG +IH  VFK+GFQWDVF+A+SL+HMY +FG  GIAR +F+ M 
Sbjct: 175 FYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP 234

Query: 361 FRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICRGCL 540
           FRD G WNA+ISGL Q GN  +AL++LD+M+ +GI MD+VTV+++LPVCAQ+ DI    L
Sbjct: 235 FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATL 294

Query: 541 IHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNNY 720
           IHLYVIKHGLEFELFV NAL+NMYAKFG L DAQKVF QM +RD+VSWNSIIAAYEQN+ 
Sbjct: 295 IHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDD 354

Query: 721 PDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQNSRSL 846
           P TA   + +MQ++G+EPDLLT+VSLAS  AQ++D +NSRS+
Sbjct: 355 PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSV 396



 Score =  160 bits (404), Expect = 4e-37
 Identities = 84/256 (32%), Positives = 151/256 (58%), Gaps = 4/256 (1%)
 Frame = +1

Query: 1   VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
           ++ Y+  G + ++R  F  +P +++  WN+MIS  ++NG    A++ L EM +   +  D
Sbjct: 214 IHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL-EGINMD 272

Query: 181 FYTFPTVLKAC---GNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
             T  ++L  C   G+    + IH  V K G ++++F++++L++MY KFG+ G A+++F 
Sbjct: 273 SVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQ 332

Query: 352 GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
            M  RD   WN+II+   Q  +PV A     KM+ +G+  D +T+ +L  + AQ  D   
Sbjct: 333 QMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKN 392

Query: 532 GCLIHLYVIKHGLEFE-LFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYE 708
              +H ++++ G   E + +GNA+++MYAK G++  A KVF+ + V+D+VSWN++I+ Y 
Sbjct: 393 SRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYT 452

Query: 709 QNNYPDTALNLYCEMQ 756
           QN     A+ +Y  M+
Sbjct: 453 QNGLASEAIEVYRMME 468



 Score =  135 bits (341), Expect = 9e-30
 Identities = 82/278 (29%), Positives = 150/278 (53%), Gaps = 5/278 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            +N YA  G +  +++ F  +  ++V  WNS+I++Y +N     A    ++M + + + PD
Sbjct: 315  INMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL-NGLEPD 373

Query: 181  FYTFPTVLKACG---NYIDGSQIHTLVFKMGFQWD-VFIASSLVHMYCKFGSTGIAREIF 348
              T  ++        +Y +   +H  + + G+  + V I ++++ MY K G    A ++F
Sbjct: 374  LLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVF 433

Query: 349  NGMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKS-DGIAMDAVTVSTLLPVCAQIDDI 525
            N +  +D   WN +ISG  Q G   EA+E+   M+    I ++  T  ++L   A +  +
Sbjct: 434  NLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGAL 493

Query: 526  CRGCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAY 705
             +G  IH ++IK  L  ++FVG  L+++Y K G L DA  +F Q+     V WN+II+ +
Sbjct: 494  QQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCH 553

Query: 706  EQNNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQT 819
              + + + AL L+ EMQ +GV+PD +T +SL S+ + +
Sbjct: 554  GIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHS 591



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
 Frame = +1

Query: 10   YANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPDFYT 189
            YA LG I  + + F+ IP K+V  WN++IS Y +NG   +A+     M     ++ +  T
Sbjct: 420  YAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGT 479

Query: 190  FPTVLKA---CGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMT 360
            + ++L A    G    G +IH  + K     DVF+ + L+ +Y K G    A  +F  + 
Sbjct: 480  WVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP 539

Query: 361  FRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICRGCL 540
                  WNAIIS    +G+  +AL++  +M+ +G+  D VT  +LL  C+    +  G  
Sbjct: 540  RESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKW 599

Query: 541  IHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVR-DLVSWNSIIAA 702
                + ++G++  L     +V++  + G L+ A      M +  D   W +++ A
Sbjct: 600  FFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGA 654


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  374 bits (959), Expect = e-101
 Identities = 175/282 (62%), Positives = 226/282 (80%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            VN YANLG++SLSR TF  IP+K+V+ WNSMIS+YV NG + +A+   Y++L+ S +RPD
Sbjct: 158  VNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217

Query: 181  FYTFPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMT 360
            FYTFP VLKACG  +DG +IH   FK+GFQW+VF+A+SL+HMY +FG TGIAR +F+ M 
Sbjct: 218  FYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP 277

Query: 361  FRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICRGCL 540
            FRD G WNA+ISGL Q GN  +AL++LD+M+ +GI M+ VTV ++LPVC Q+ DI    L
Sbjct: 278  FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAML 337

Query: 541  IHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNNY 720
            IHLYVIKHGLEF+LFV NAL+NMYAKFG L+DA+K F QM + D+VSWNSIIAAYEQN+ 
Sbjct: 338  IHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDD 397

Query: 721  PDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQNSRSL 846
            P TA   + +MQ++G +PDLLT+VSLAS VAQ++D +NSRS+
Sbjct: 398  PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSV 439



 Score =  157 bits (397), Expect = 3e-36
 Identities = 91/276 (32%), Positives = 156/276 (56%), Gaps = 5/276 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            ++ Y+  G   ++R  F  +P +++  WN+MIS  ++NG    A++ L EM +   ++ +
Sbjct: 257  IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL-EGIKMN 315

Query: 181  FYTFPTVLKAC---GNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
            F T  ++L  C   G+      IH  V K G ++D+F++++L++MY KFG+   AR+ F 
Sbjct: 316  FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375

Query: 352  GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
             M   D   WN+II+   Q  +PV A     KM+ +G   D +T+ +L  + AQ  D   
Sbjct: 376  QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435

Query: 532  GCLIHLYVIKHG-LEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYE 708
               +H ++++ G L  ++ +GNA+V+MYAK GLL  A KVF+ + V+D++SWN++I  Y 
Sbjct: 436  SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYA 495

Query: 709  QNNYPDTALNLYCEM-QMDGVEPDLLTMVSLASSVA 813
            QN     A+ +Y  M +   + P+  T VS+  + A
Sbjct: 496  QNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 531



 Score =  129 bits (325), Expect = 6e-28
 Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 5/278 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            +N YA  G +  +R+ F  +   +V  WNS+I++Y +N     A +  +  +  +  +PD
Sbjct: 358  INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA-HGFFVKMQLNGFQPD 416

Query: 181  FYTFPTVLKACGNYID---GSQIHTLVFKMGFQW-DVFIASSLVHMYCKFGSTGIAREIF 348
              T  ++        D      +H  + + G+   DV I +++V MY K G    A ++F
Sbjct: 417  LLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF 476

Query: 349  NGMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKS-DGIAMDAVTVSTLLPVCAQIDDI 525
              +  +D   WN +I+G  Q G   EA+E+   M+    I  +  T  ++LP  A +  +
Sbjct: 477  EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 536

Query: 526  CRGCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAY 705
             +G  IH  VIK  L  ++FV   L+++Y K G L DA  +F Q+     V+WN+II+ +
Sbjct: 537  QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596

Query: 706  EQNNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQT 819
              + + +  L L+ EM  +GV+PD +T VSL S+ + +
Sbjct: 597  GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 634



 Score =  100 bits (250), Expect = 3e-19
 Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
 Frame = +1

Query: 238 IHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMTFRDKGCWNAIISGLCQYGN 417
           +H L+   G    +FI++ LV++Y   G   ++R  F+ +  +D   WN++IS     G+
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 418 PVEALE-ILDKMKSDGIAMDAVTVSTLLPVCAQIDDICRGCLIHLYVIKHGLEFELFVGN 594
             EA+      +    I  D  T   +L  C  + D   G  IH +  K G ++ +FV  
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 254

Query: 595 ALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNNYPDTALNLYCEMQMDGVEP 774
           +L++MY++FG    A+ +FD M  RD+ SWN++I+   QN     AL++  EM+++G++ 
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 775 DLLTMVSLASSVAQTKD 825
           + +T+VS+     Q  D
Sbjct: 315 NFVTVVSILPVCPQLGD 331



 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            V+ YA LG +  + + F  IP K+V  WN++I+ Y +NG   +A+     M     + P+
Sbjct: 460  VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 519

Query: 181  FYTFPTVLKA---CGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
              T+ ++L A    G    G +IH  V K     DVF+A+ L+ +Y K G    A  +F 
Sbjct: 520  QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFY 579

Query: 352  GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
             +       WNAIIS    +G+  + L++  +M  +G+  D VT  +LL  C+    +  
Sbjct: 580  QVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 639

Query: 532  GCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVR-DLVSWNSIIAA 702
            G      + ++G++  L     +V++  + G L+ A      M ++ D   W +++ A
Sbjct: 640  GKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 697


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  374 bits (959), Expect = e-101
 Identities = 175/282 (62%), Positives = 226/282 (80%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            VN YANLG++SLSR TF  IP+K+V+ WNSMIS+YV NG + +A+   Y++L+ S +RPD
Sbjct: 158  VNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217

Query: 181  FYTFPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMT 360
            FYTFP VLKACG  +DG +IH   FK+GFQW+VF+A+SL+HMY +FG TGIAR +F+ M 
Sbjct: 218  FYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMP 277

Query: 361  FRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICRGCL 540
            FRD G WNA+ISGL Q GN  +AL++LD+M+ +GI M+ VTV ++LPVC Q+ DI    L
Sbjct: 278  FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAML 337

Query: 541  IHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNNY 720
            IHLYVIKHGLEF+LFV NAL+NMYAKFG L+DA+K F QM + D+VSWNSIIAAYEQN+ 
Sbjct: 338  IHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDD 397

Query: 721  PDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQNSRSL 846
            P TA   + +MQ++G +PDLLT+VSLAS VAQ++D +NSRS+
Sbjct: 398  PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSV 439



 Score =  158 bits (400), Expect = 1e-36
 Identities = 91/276 (32%), Positives = 157/276 (56%), Gaps = 5/276 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            ++ Y+  G   ++R  F  +P +++  WN+MIS  ++NG    A++ L EM +   ++ +
Sbjct: 257  IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL-EGIKMN 315

Query: 181  FYTFPTVLKAC---GNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
            F T  ++L  C   G+      IH  V K G ++D+F++++L++MY KFG+   AR+ F 
Sbjct: 316  FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375

Query: 352  GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
             M   D   WN+II+   Q  +PV A     KM+ +G   D +T+ +L  + AQ  D   
Sbjct: 376  QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435

Query: 532  GCLIHLYVIKHG-LEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYE 708
               +H ++++ G L  ++ +GNA+V+MYAK GLL  A KVF+ ++V+D++SWN++I  Y 
Sbjct: 436  SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYA 495

Query: 709  QNNYPDTALNLYCEM-QMDGVEPDLLTMVSLASSVA 813
            QN     A+ +Y  M +   + P+  T VS+  + A
Sbjct: 496  QNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 531



 Score =  129 bits (325), Expect = 6e-28
 Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 5/278 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            +N YA  G +  +R+ F  +   +V  WNS+I++Y +N     A +  +  +  +  +PD
Sbjct: 358  INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA-HGFFVKMQLNGFQPD 416

Query: 181  FYTFPTVLKACGNYID---GSQIHTLVFKMGFQW-DVFIASSLVHMYCKFGSTGIAREIF 348
              T  ++        D      +H  + + G+   DV I +++V MY K G    A ++F
Sbjct: 417  LLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVF 476

Query: 349  NGMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKS-DGIAMDAVTVSTLLPVCAQIDDI 525
              +  +D   WN +I+G  Q G   EA+E+   M+    I  +  T  ++LP  A +  +
Sbjct: 477  EIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 536

Query: 526  CRGCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAY 705
             +G  IH  VIK  L  ++FV   L+++Y K G L DA  +F Q+     V+WN+II+ +
Sbjct: 537  QQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596

Query: 706  EQNNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQT 819
              + + +  L L+ EM  +GV+PD +T VSL S+ + +
Sbjct: 597  GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 634



 Score =  100 bits (249), Expect = 4e-19
 Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
 Frame = +1

Query: 238 IHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMTFRDKGCWNAIISGLCQYGN 417
           +H L+   G    +FI++ LV++Y   G   ++R  F+ +  +D   WN++IS     G+
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 418 PVEALE-ILDKMKSDGIAMDAVTVSTLLPVCAQIDDICRGCLIHLYVIKHGLEFELFVGN 594
             EA+      +    I  D  T   +L  C  + D   G  IH +  K G ++ +FV  
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAA 254

Query: 595 ALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNNYPDTALNLYCEMQMDGVEP 774
           +L++MY++FG    A+ +FD M  RD+ SWN++I+   QN     AL++  EM+++G++ 
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 775 DLLTMVSLASSVAQTKD 825
           + +T+VS+     Q  D
Sbjct: 315 NFVTVVSILPVCPQLGD 331



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 4/238 (1%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            V+ YA LG +  + + F  I  K+V  WN++I+ Y +NG   +A+     M     + P+
Sbjct: 460  VDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 519

Query: 181  FYTFPTVLKA---CGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
              T+ ++L A    G    G +IH  V K     DVF+A+ L+ +Y K G    A  +F 
Sbjct: 520  QGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFY 579

Query: 352  GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
             +       WNAIIS    +G+  + L++  +M  +G+  D VT  +LL  C+    +  
Sbjct: 580  QVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 639

Query: 532  GCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVR-DLVSWNSIIAA 702
            G      + ++G++  L     +V++  + G L+ A      M ++ D   W +++ A
Sbjct: 640  GKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGA 697


>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499957|gb|AES81160.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  342 bits (876), Expect = 8e-92
 Identities = 164/285 (57%), Positives = 214/285 (75%), Gaps = 3/285 (1%)
 Frame = +1

Query: 1   VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDA---VNSLYEMLMTSNV 171
           +N Y   G+ISLSR TF YI KKN+F WNS+IS+YVR G Y +A   VN L+ M    ++
Sbjct: 61  INLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHL 120

Query: 172 RPDFYTFPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
           RPDFYTFP +LKAC + +DG ++H  VFKMGF+ DVF+A+SLVH+Y ++G   +A ++F 
Sbjct: 121 RPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFV 180

Query: 352 GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
            M  +D G WNA+ISG CQ GN   AL +L++MK +G+ MD +TV+++LPVCAQ DD+  
Sbjct: 181 DMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240

Query: 532 GCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQ 711
           G LIHL+V+KHGL+ ++FV NAL+NMY+KFG L+DAQ VFDQM VRDLVSWNSIIAAYEQ
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 712 NNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQNSRSL 846
           NN P TAL  +  MQ+ G+ PDLLT+VSL S  +Q  D + SRS+
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345



 Score =  120 bits (301), Expect = 4e-25
 Identities = 76/279 (27%), Positives = 144/279 (51%), Gaps = 6/279 (2%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            +N Y+  G +  ++  F  +  +++  WNS+I++Y +N     A+   ++ +    +RPD
Sbjct: 264  INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALR-FFKGMQLGGIRPD 322

Query: 181  FYTFPTVLKACGNYIDGSQIHTLV-FKMGFQW---DVFIASSLVHMYCKFGSTGIAREIF 348
              T  ++        D     +++ F +  +W   DV I ++LV+MY K G    A  +F
Sbjct: 323  LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382

Query: 349  NGMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKS--DGIAMDAVTVSTLLPVCAQIDD 522
            + +  +D   WN +++G  Q G   EA++  + M+   D I      VS ++P  + +  
Sbjct: 383  DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVS-IIPAYSHVGA 441

Query: 523  ICRGCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAA 702
            + +G  IH  +IK+ L  ++FV   L+++Y K G L+DA  +F ++     V WN+IIA+
Sbjct: 442  LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501

Query: 703  YEQNNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQT 819
               +   + AL L+ +M  + V+ D +T VSL S+ + +
Sbjct: 502  LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540



 Score =  108 bits (269), Expect = 2e-21
 Identities = 63/219 (28%), Positives = 117/219 (53%), Gaps = 4/219 (1%)
 Frame = +1

Query: 190 FPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMTFRD 369
           F  +  +C N     ++H L+   G   ++ +++ L+++Y   G   ++R  F+ +  ++
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 370 KGCWNAIISGLCQYGNPVEALEILDKMKS----DGIAMDAVTVSTLLPVCAQIDDICRGC 537
              WN+IIS   ++G   EA+  ++++ S      +  D  T   +L  C  + D   G 
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141

Query: 538 LIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNN 717
            +H  V K G E ++FV  +LV++Y+++G+L  A KVF  M V+D+ SWN++I+ + QN 
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201

Query: 718 YPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQN 834
               AL +   M+ +GV+ D +T+ S+    AQ+ D  N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240


>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  342 bits (876), Expect = 8e-92
 Identities = 164/285 (57%), Positives = 214/285 (75%), Gaps = 3/285 (1%)
 Frame = +1

Query: 1   VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDA---VNSLYEMLMTSNV 171
           +N Y   G+ISLSR TF YI KKN+F WNS+IS+YVR G Y +A   VN L+ M    ++
Sbjct: 61  INLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHL 120

Query: 172 RPDFYTFPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFN 351
           RPDFYTFP +LKAC + +DG ++H  VFKMGF+ DVF+A+SLVH+Y ++G   +A ++F 
Sbjct: 121 RPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFV 180

Query: 352 GMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKSDGIAMDAVTVSTLLPVCAQIDDICR 531
            M  +D G WNA+ISG CQ GN   AL +L++MK +G+ MD +TV+++LPVCAQ DD+  
Sbjct: 181 DMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240

Query: 532 GCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQ 711
           G LIHL+V+KHGL+ ++FV NAL+NMY+KFG L+DAQ VFDQM VRDLVSWNSIIAAYEQ
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 712 NNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQNSRSL 846
           NN P TAL  +  MQ+ G+ PDLLT+VSL S  +Q  D + SRS+
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345



 Score =  120 bits (301), Expect = 4e-25
 Identities = 76/279 (27%), Positives = 144/279 (51%), Gaps = 6/279 (2%)
 Frame = +1

Query: 1    VNHYANLGEISLSRRTFSYIPKKNVFVWNSMISSYVRNGCYRDAVNSLYEMLMTSNVRPD 180
            +N Y+  G +  ++  F  +  +++  WNS+I++Y +N     A+   ++ +    +RPD
Sbjct: 264  INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALR-FFKGMQLGGIRPD 322

Query: 181  FYTFPTVLKACGNYIDGSQIHTLV-FKMGFQW---DVFIASSLVHMYCKFGSTGIAREIF 348
              T  ++        D     +++ F +  +W   DV I ++LV+MY K G    A  +F
Sbjct: 323  LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382

Query: 349  NGMTFRDKGCWNAIISGLCQYGNPVEALEILDKMKS--DGIAMDAVTVSTLLPVCAQIDD 522
            + +  +D   WN +++G  Q G   EA++  + M+   D I      VS ++P  + +  
Sbjct: 383  DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVS-IIPAYSHVGA 441

Query: 523  ICRGCLIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAA 702
            + +G  IH  +IK+ L  ++FV   L+++Y K G L+DA  +F ++     V WN+IIA+
Sbjct: 442  LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501

Query: 703  YEQNNYPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQT 819
               +   + AL L+ +M  + V+ D +T VSL S+ + +
Sbjct: 502  LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540



 Score =  108 bits (269), Expect = 2e-21
 Identities = 63/219 (28%), Positives = 117/219 (53%), Gaps = 4/219 (1%)
 Frame = +1

Query: 190 FPTVLKACGNYIDGSQIHTLVFKMGFQWDVFIASSLVHMYCKFGSTGIAREIFNGMTFRD 369
           F  +  +C N     ++H L+   G   ++ +++ L+++Y   G   ++R  F+ +  ++
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 370 KGCWNAIISGLCQYGNPVEALEILDKMKS----DGIAMDAVTVSTLLPVCAQIDDICRGC 537
              WN+IIS   ++G   EA+  ++++ S      +  D  T   +L  C  + D   G 
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141

Query: 538 LIHLYVIKHGLEFELFVGNALVNMYAKFGLLKDAQKVFDQMVVRDLVSWNSIIAAYEQNN 717
            +H  V K G E ++FV  +LV++Y+++G+L  A KVF  M V+D+ SWN++I+ + QN 
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201

Query: 718 YPDTALNLYCEMQMDGVEPDLLTMVSLASSVAQTKDSQN 834
               AL +   M+ +GV+ D +T+ S+    AQ+ D  N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVIN 240