BLASTX nr result

ID: Bupleurum21_contig00034982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034982
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511502.1| LOB domain-containing protein, putative [Ric...   121   5e-26
ref|XP_002317998.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002321540.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003634270.1| PREDICTED: LOW QUALITY PROTEIN: LOB domain-c...   106   2e-21
emb|CBI15291.3| unnamed protein product [Vitis vinifera]              106   2e-21

>ref|XP_002511502.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223550617|gb|EEF52104.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 284

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 3/100 (3%)
 Frame = -1

Query: 298 QPDKFRNAHRLFGVRNISKILEELDPSLKSEAMRSIIYQADIRDRFPVLGCVGVIMHLRY 119
           QP  F+NAH+LFGVRNI+K+LE LD   K EAMRSIIYQA+IR+RFPV GC G+I  L Y
Sbjct: 35  QPKMFQNAHKLFGVRNITKMLETLDAPQKQEAMRSIIYQANIRERFPVHGCWGIICQLHY 94

Query: 118 QIGQLEEELHAVHAQLALYR--HQ-EMSTVAPNDASQLQL 8
           QI Q EEE+HAVHAQL +YR  HQ  +S++  + ASQL+L
Sbjct: 95  QIRQTEEEIHAVHAQLEMYRQHHQHHISSLTDDVASQLEL 134


>ref|XP_002317998.1| predicted protein [Populus trichocarpa] gi|222858671|gb|EEE96218.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/100 (57%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
 Frame = -1

Query: 298 QPDKFRNAHRLFGVRNISKILEELDPSLKSEAMRSIIYQADIRDRFPVLGCVGVIMHLRY 119
           QP  F+NAH+LFGVR I +ILE LD   K EAMRSIIYQ++IRDRFPV GC+G+I  L +
Sbjct: 35  QPKMFQNAHKLFGVRKILRILENLDYLQKEEAMRSIIYQSNIRDRFPVHGCLGIIYQLHF 94

Query: 118 QIGQLEEELHAVHAQLALYR---HQEMSTVAPNDASQLQL 8
           QI Q EEEL AV+A L +YR   H +++ +  +  SQL+L
Sbjct: 95  QIRQAEEELRAVYAHLEMYRQHHHHQIAALTEDVPSQLEL 134


>ref|XP_002321540.1| predicted protein [Populus trichocarpa] gi|222868536|gb|EEF05667.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  107 bits (267), Expect = 1e-21
 Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
 Frame = -1

Query: 298 QPDKFRNAHRLFGVRNISKILEELDPSLKSEAMRSIIYQADIRDRFPVLGCVGVIMHLRY 119
           QP  F+N H+LFGVR I KILE LDP    EAMRSIIYQA+IRDRFPV GC G+I  L +
Sbjct: 35  QPRLFQNTHKLFGVRKILKILENLDPHQHEEAMRSIIYQANIRDRFPVHGCWGIICKLHF 94

Query: 118 QIGQLEEELHAVHAQLALYRHQ----EMSTVAPNDASQLQL 8
           QI Q EEEL AV A L +YR Q    +++ +  +  SQL+L
Sbjct: 95  QIRQAEEELRAVLAHLEMYRQQQHQHQIAALTEDVPSQLEL 135


>ref|XP_003634270.1| PREDICTED: LOW QUALITY PROTEIN: LOB domain-containing protein
           27-like, partial [Vitis vinifera]
          Length = 323

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 4/103 (3%)
 Frame = -1

Query: 298 QPDKFRNAHRLFGVRNISKILEELDPSLKSEAMRSIIYQADIRDRFPVLGCVGVIMHLRY 119
           QP  F +AHRLFGV NI KIL++LDP+ K  AM+SIIYQA IR+R+PV GC+G+I  L Y
Sbjct: 57  QPKMFADAHRLFGVSNILKILKQLDPTQKLTAMQSIIYQATIRERYPVSGCLGLICQLHY 116

Query: 118 QIGQLEEELHAVHAQLALYR---HQEMSTV-APNDASQLQLQL 2
           QI Q E+ELH V +QL + R   HQ++    AP+D+S   L+L
Sbjct: 117 QIRQTEDELHVVLSQLEICRQHHHQQIQMASAPSDSSSSPLEL 159


>emb|CBI15291.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 4/103 (3%)
 Frame = -1

Query: 298 QPDKFRNAHRLFGVRNISKILEELDPSLKSEAMRSIIYQADIRDRFPVLGCVGVIMHLRY 119
           QP  F +AHRLFGV NI KIL++LDP+ K  AM+SIIYQA IR+R+PV GC+G+I  L Y
Sbjct: 35  QPKMFADAHRLFGVSNILKILKQLDPTQKLTAMQSIIYQATIRERYPVSGCLGLICQLHY 94

Query: 118 QIGQLEEELHAVHAQLALYR---HQEMSTV-APNDASQLQLQL 2
           QI Q E+ELH V +QL + R   HQ++    AP+D+S   L+L
Sbjct: 95  QIRQTEDELHVVLSQLEICRQHHHQQIQMASAPSDSSSSPLEL 137


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