BLASTX nr result

ID: Bupleurum21_contig00034976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034976
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138443.1| PREDICTED: uncharacterized protein LOC101208...    93   3e-17
ref|XP_002315190.1| predicted protein [Populus trichocarpa] gi|1...    89   3e-16
ref|XP_002871190.1| hypothetical protein ARALYDRAFT_487395 [Arab...    86   2e-15
ref|NP_196214.1| protein maternal effect embryo arrest 60 [Arabi...    86   2e-15
ref|XP_002524257.1| conserved hypothetical protein [Ricinus comm...    84   9e-15

>ref|XP_004138443.1| PREDICTED: uncharacterized protein LOC101208865 [Cucumis sativus]
           gi|449495300|ref|XP_004159793.1| PREDICTED:
           uncharacterized protein LOC101224173 [Cucumis sativus]
          Length = 172

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/84 (59%), Positives = 58/84 (69%)
 Frame = -1

Query: 275 TNTSIHIMALDGIVNVNSLFTIALFLGLTINPSDPTYTLVDSKSCKASSSMAERLVSYHV 96
           T TSIHI ALDGIVNVNS+FT+A+FLGL  NP+DP   L+ S +C A  S+A  LVS+HV
Sbjct: 3   TGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSFHV 62

Query: 95  YXXXXXXXXXLIASGLKLAIRNAK 24
           Y         LIA GLK AIR AK
Sbjct: 63  YSFSSFLFSSLIALGLKQAIRIAK 86


>ref|XP_002315190.1| predicted protein [Populus trichocarpa] gi|118483550|gb|ABK93673.1|
           unknown [Populus trichocarpa]
           gi|222864230|gb|EEF01361.1| predicted protein [Populus
           trichocarpa]
          Length = 180

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
 Frame = -1

Query: 269 TSIHIMALDGIVNVNSLFTIALFLGLTINPSDPTYTLV---DSKSCKASSSMAERLVSYH 99
           TSIHI ALDGIVNVNSLFT+A+F+GL  NP+DPT TL+   D  SC  S  +AE L+++H
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPTNTLIGPNDPISCSPSPKIAEDLIAFH 62

Query: 98  VYXXXXXXXXXLIASGLKLAIRNAKKENN 12
           VY         LIA  LK AIR AK  N+
Sbjct: 63  VYSFSSFLFSSLIALALKQAIRVAKTSNH 91


>ref|XP_002871190.1| hypothetical protein ARALYDRAFT_487395 [Arabidopsis lyrata subsp.
           lyrata] gi|297317027|gb|EFH47449.1| hypothetical protein
           ARALYDRAFT_487395 [Arabidopsis lyrata subsp. lyrata]
          Length = 175

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/79 (56%), Positives = 56/79 (70%)
 Frame = -1

Query: 269 TSIHIMALDGIVNVNSLFTIALFLGLTINPSDPTYTLVDSKSCKASSSMAERLVSYHVYX 90
           TSIHI ALDGIVNVNSLFT+A+F+GL  NP+DP  +LV   +C  ++ MAE LV++HVY 
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 89  XXXXXXXXLIASGLKLAIR 33
                   LIA GLK A+R
Sbjct: 63  FASFLFSSLIALGLKQAMR 81


>ref|NP_196214.1| protein maternal effect embryo arrest 60 [Arabidopsis thaliana]
           gi|10177568|dbj|BAB10800.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554350|gb|AAM63457.1|
           unknown [Arabidopsis thaliana]
           gi|98960927|gb|ABF58947.1| At5g05950 [Arabidopsis
           thaliana] gi|110737481|dbj|BAF00683.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332003561|gb|AED90944.1| protein maternal effect
           embryo arrest 60 [Arabidopsis thaliana]
          Length = 175

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/79 (56%), Positives = 56/79 (70%)
 Frame = -1

Query: 269 TSIHIMALDGIVNVNSLFTIALFLGLTINPSDPTYTLVDSKSCKASSSMAERLVSYHVYX 90
           TSIHI ALDGIVNVNSLFT+A+F+GL  NP+DP  +LV   +C  ++ MAE LV++HVY 
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 89  XXXXXXXXLIASGLKLAIR 33
                   LIA GLK A+R
Sbjct: 63  FASFLFSSLIALGLKQAMR 81


>ref|XP_002524257.1| conserved hypothetical protein [Ricinus communis]
           gi|223536534|gb|EEF38181.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -1

Query: 269 TSIHIMALDGIVNVNSLFTIALFLGLTINPSDPTYTLV--DSKSCKASSSMAERLVSYHV 96
           TSIHI ALDGIVNVNSLFT+A+FLGLT NPSDP  + +   +  C AS S+ E LV++HV
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFLGLTWNPSDPNSSFITDPTSPCAASRSVVENLVAFHV 62

Query: 95  YXXXXXXXXXLIASGLKLAIRNAKKEN 15
           Y         L+A  LK A R  K  N
Sbjct: 63  YSFSSFLFSSLLALALKQAFRITKSPN 89


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