BLASTX nr result

ID: Bupleurum21_contig00034975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034975
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   147   1e-33
ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...   144   8e-33
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   142   3e-32
ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]...   137   1e-30
ref|XP_003624125.1| ALBINO3-like protein [Medicago truncatula] g...   127   7e-28

>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
           gi|297735304|emb|CBI17666.3| unnamed protein product
           [Vitis vinifera]
          Length = 572

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/129 (51%), Positives = 88/129 (68%)
 Frame = +1

Query: 10  DSIFPIRALISLLDGYHDFTGFPWWVIISSSVFAFRISMFPIIILQLTKLKHIQMCXXXX 189
           +SI P+R L+SLLDGYHD TG+PWW+II+SS  A RI++FPI++LQL K+K I       
Sbjct: 99  ESIPPVRFLVSLLDGYHDVTGWPWWIIIASSTLALRIALFPILVLQLKKMKRIAELLPKL 158

Query: 190 XXXXXXXXSGKSYIGQFSKFTKQRKAIGCPPMIWHIVPAAIQAPCFILGVTTVRRMALTH 369
                   SG+SY  Q S F K+++AIGCP  +W +   + Q PCFIL + ++R M+L H
Sbjct: 159 PPPLPPPLSGRSYFDQISLFRKEKRAIGCPSFLWFLASLSTQVPCFILWMMSIRWMSLDH 218

Query: 370 HPGFDYGGA 396
           HPGFD GGA
Sbjct: 219 HPGFDSGGA 227


>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
           sativus]
          Length = 573

 Score =  144 bits (363), Expect = 8e-33
 Identities = 65/130 (50%), Positives = 86/130 (66%)
 Frame = +1

Query: 7   QDSIFPIRALISLLDGYHDFTGFPWWVIISSSVFAFRISMFPIIILQLTKLKHIQMCXXX 186
           ++SI PI+ L S+LDG+H +TG PWW +I+SS  A R ++ PI+I+QL KLK I      
Sbjct: 120 ENSILPIQQLTSILDGFHQYTGMPWWAVIASSTLALRFTLLPILIVQLNKLKRIGELFPK 179

Query: 187 XXXXXXXXXSGKSYIGQFSKFTKQRKAIGCPPMIWHIVPAAIQAPCFILGVTTVRRMALT 366
                    SG+SYI Q S F K+RKAIGCP  +W      IQ PCF+L + T+R+M+L 
Sbjct: 180 LPPPLPPPLSGRSYIDQISLFRKERKAIGCPSFLWFAAYFFIQVPCFLLWMVTIRKMSLD 239

Query: 367 HHPGFDYGGA 396
           H+PGFDYGGA
Sbjct: 240 HYPGFDYGGA 249


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
           gi|223548578|gb|EEF50069.1| cytochrome oxidase
           biogenesis protein, putative [Ricinus communis]
          Length = 548

 Score =  142 bits (358), Expect = 3e-32
 Identities = 59/129 (45%), Positives = 89/129 (68%)
 Frame = +1

Query: 7   QDSIFPIRALISLLDGYHDFTGFPWWVIISSSVFAFRISMFPIIILQLTKLKHIQMCXXX 186
           ++SI P+R L+S+LD +HD +G PWW++I+S+  A R+++FP+++LQL KLK I      
Sbjct: 97  EESILPVRVLVSVLDEFHDLSGLPWWLVIASATVAMRVTLFPLLVLQLHKLKKISELFPK 156

Query: 187 XXXXXXXXXSGKSYIGQFSKFTKQRKAIGCPPMIWHIVPAAIQAPCFILGVTTVRRMALT 366
                    SGKS++ Q S F K+R+A+GCP  +W +   + Q PCF+L +T++RRM+L 
Sbjct: 157 LPPPFPPPLSGKSFVDQISLFHKERRALGCPSYLWFLAYVSAQVPCFLLWMTSIRRMSLD 216

Query: 367 HHPGFDYGG 393
           HHPGFD GG
Sbjct: 217 HHPGFDCGG 225


>ref|XP_002313020.1| inner membrane protein [Populus trichocarpa]
           gi|222849428|gb|EEE86975.1| inner membrane protein
           [Populus trichocarpa]
          Length = 499

 Score =  137 bits (344), Expect = 1e-30
 Identities = 60/129 (46%), Positives = 85/129 (65%)
 Frame = +1

Query: 10  DSIFPIRALISLLDGYHDFTGFPWWVIISSSVFAFRISMFPIIILQLTKLKHIQMCXXXX 189
           + I P+ ++I LLD YHD TG PWW+II+SS  A R+++FP+ +LQ+ K+K I       
Sbjct: 89  NGILPVDSMIWLLDSYHDLTGLPWWIIIASSTLAMRLTLFPLHVLQMHKIKKISRSFSKL 148

Query: 190 XXXXXXXXSGKSYIGQFSKFTKQRKAIGCPPMIWHIVPAAIQAPCFILGVTTVRRMALTH 369
                   SG+SYI Q S F  +R+AIGCP  +W +   ++Q PCF+L +T++RRM L +
Sbjct: 149 PPLFPPPLSGRSYIEQISLFRNERRAIGCPSYLWFLAFLSVQIPCFLLWMTSIRRMCLDN 208

Query: 370 HPGFDYGGA 396
           HPGFD GGA
Sbjct: 209 HPGFDCGGA 217


>ref|XP_003624125.1| ALBINO3-like protein [Medicago truncatula]
           gi|355499140|gb|AES80343.1| ALBINO3-like protein
           [Medicago truncatula]
          Length = 595

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/132 (45%), Positives = 81/132 (61%)
 Frame = +1

Query: 1   TEQDSIFPIRALISLLDGYHDFTGFPWWVIISSSVFAFRISMFPIIILQLTKLKHIQMCX 180
           +E   +FP+RA+ISLL+ +HD TGFPWW+ I SS  A R+ +   +I  L KLK I    
Sbjct: 83  SEDIPVFPVRAVISLLESFHDLTGFPWWLTIISSTLALRLVLLCPLIFTLHKLKRISEFV 142

Query: 181 XXXXXXXXXXXSGKSYIGQFSKFTKQRKAIGCPPMIWHIVPAAIQAPCFILGVTTVRRMA 360
                      SGKSYI Q   F ++RKA+GCP   W ++P  +Q PCF + + ++RRM+
Sbjct: 143 PKLPPPFPPPFSGKSYIRQMRFFEEKRKAVGCPSYAWPLLPFIVQVPCFFVWMFSIRRMS 202

Query: 361 LTHHPGFDYGGA 396
           L  HPGFD GGA
Sbjct: 203 LDGHPGFDCGGA 214


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