BLASTX nr result

ID: Bupleurum21_contig00034969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034969
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vi...   119   3e-25
emb|CBI36955.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002519214.1| DELLA protein RGL2, putative [Ricinus commun...   112   2e-23
ref|XP_002329212.1| GRAS family transcription factor [Populus tr...   111   5e-23
ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun...   110   9e-23

>ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
          Length = 616

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/95 (55%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -2

Query: 406 RFSSESMF-GRGIKNIVASEGKERIVRQVKNNVWVSFFGQFNMVQKELSRSCLYQASLVV 230
           R  +E+MF G GI+N++A+EG+ER+VR VK +VW +FF +F MV+ E S + LYQASL++
Sbjct: 521 RMITEAMFFGEGIRNMIAAEGEERVVRNVKMDVWRAFFSRFGMVEMEFSEASLYQASLII 580

Query: 229 KNYDCETSCSLKMDGKSSIIGWKGTSVHSLSAWEF 125
           K + C + CSL+ DGK  I+GWKGT +HSLSAW+F
Sbjct: 581 KRFACGSCCSLEKDGKCLIVGWKGTPIHSLSAWKF 615


>emb|CBI36955.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/95 (55%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -2

Query: 406 RFSSESMF-GRGIKNIVASEGKERIVRQVKNNVWVSFFGQFNMVQKELSRSCLYQASLVV 230
           R  +E+MF G GI+N++A+EG+ER+VR VK +VW +FF +F MV+ E S + LYQASL++
Sbjct: 487 RMITEAMFFGEGIRNMIAAEGEERVVRNVKMDVWRAFFSRFGMVEMEFSEASLYQASLII 546

Query: 229 KNYDCETSCSLKMDGKSSIIGWKGTSVHSLSAWEF 125
           K + C + CSL+ DGK  I+GWKGT +HSLSAW+F
Sbjct: 547 KRFACGSCCSLEKDGKCLIVGWKGTPIHSLSAWKF 581


>ref|XP_002519214.1| DELLA protein RGL2, putative [Ricinus communis]
           gi|223541529|gb|EEF43078.1| DELLA protein RGL2, putative
           [Ricinus communis]
          Length = 576

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/88 (57%), Positives = 66/88 (75%)
 Frame = -2

Query: 385 FGRGIKNIVASEGKERIVRQVKNNVWVSFFGQFNMVQKELSRSCLYQASLVVKNYDCETS 206
           FG GIKNIVA+EGKER +R  K + W +FF +F M++ ELS S L QA L+ K + C  +
Sbjct: 489 FGEGIKNIVATEGKERKIRNAKLDAWRAFFTRFGMLETELSTSSLCQAKLIAKKFACGNA 548

Query: 205 CSLKMDGKSSIIGWKGTSVHSLSAWEFL 122
           C+L MDGKS +IGWKGT +HSLSAW+F+
Sbjct: 549 CTLSMDGKSLLIGWKGTPMHSLSAWKFI 576


>ref|XP_002329212.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222870993|gb|EEF08124.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 594

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = -2

Query: 415 DPIRFSSESM-FGRGIKNIVASEGKERIVRQVKNNVWVSFFGQFNMVQKELSRSCLYQAS 239
           DP R  +ES+ FG GI+N VASEG+ERI+R VK +VW +FF +F MV+ +LS S L QA 
Sbjct: 496 DPNRMITESLYFGEGIRNSVASEGEERIIRSVKLDVWRAFFARFGMVETDLSSSSLDQAK 555

Query: 238 LVVKNYDCETSCSLKMDGKSSIIGWKGTSVHSLSAWEF 125
           L+VK ++  +S +L +DGKS + GWKGT +HSLSAW F
Sbjct: 556 LIVKKFNFASSFTLDVDGKSLLFGWKGTPLHSLSAWNF 593


>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 562

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 415 DPIRFSSESMF-GRGIKNIVASEGKERIVRQVKNNVWVSFFGQFNMVQKELSRSCLYQAS 239
           DP R ++ES+F   GI+NIVASEG+ER +R VK +VW SFF +F M+Q ELS S LYQAS
Sbjct: 464 DPNRMAAESVFFHHGIRNIVASEGEERRIRHVKIDVWRSFFARFGMIQTELSTSSLYQAS 523

Query: 238 LVVKNYDCETSCSLKMDGKSSIIGWKGTSVHSLSAWEFL 122
           LV+K + C +SC+L ++ KS  I WK T + SLS W+F+
Sbjct: 524 LVLKKFPCGSSCTLDVNEKSLNISWKATPISSLSVWKFI 562


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