BLASTX nr result

ID: Bupleurum21_contig00034947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034947
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   189   3e-46
ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   189   3e-46
ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu...   184   9e-45
ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791...   182   2e-44
ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219...   182   3e-44

>ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  189 bits (479), Expect = 3e-46
 Identities = 93/140 (66%), Positives = 104/140 (74%), Gaps = 3/140 (2%)
 Frame = -3

Query: 411 CQEDIDFLGDVFIWXXXXXXXXXXXGVRKFHRS---GVTMDSLLPKALESTMVLDAQSMA 241
           C ED D LGDV+IW           GV K          +D+LLPKALEST+VLD   +A
Sbjct: 237 CPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIA 296

Query: 240 CGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHTCA 61
           CG RH VLVTRQGEIFSWGEE GGRLGHGVEADVS+PK+I TLSG N+E+VACGEYHTCA
Sbjct: 297 CGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 60  VTLAGDLYSWGDGNFNSGLL 1
           VTL+GDLY+WGDG  N GLL
Sbjct: 357 VTLSGDLYTWGDGTHNYGLL 376



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
 Frame = -3

Query: 246 MACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHT 67
           ++CG+ H  +VT  G++F++G+   G LGHG     + P+ ++TL G+    VACG +HT
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 66  CAVTLA---------------GDLYSWGDGN 19
            A   A                 LY+WGDG+
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGD 492



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = -3

Query: 306 TMDSLLPKALESTMVLD-AQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNP 130
           T +  LP  +E  +     + +ACGS HV ++T + E+++WG+   G+LGHG     + P
Sbjct: 552 TANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTP 611

Query: 129 KLIQTLSGINIEMVACGEYHTCAVTL 52
            ++  L    ++ VACG   T  + +
Sbjct: 612 TIVDVLKDKQVKNVACGSKFTVVICI 637


>ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  189 bits (479), Expect = 3e-46
 Identities = 93/140 (66%), Positives = 104/140 (74%), Gaps = 3/140 (2%)
 Frame = -3

Query: 411 CQEDIDFLGDVFIWXXXXXXXXXXXGVRKFHRS---GVTMDSLLPKALESTMVLDAQSMA 241
           C ED D LGDV+IW           GV K          +D+LLPKALEST+VLD   +A
Sbjct: 237 CPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIA 296

Query: 240 CGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHTCA 61
           CG RH VLVTRQGEIFSWGEE GGRLGHGVEADVS+PK+I TLSG N+E+VACGEYHTCA
Sbjct: 297 CGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 60  VTLAGDLYSWGDGNFNSGLL 1
           VTL+GDLY+WGDG  N GLL
Sbjct: 357 VTLSGDLYTWGDGTHNYGLL 376



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
 Frame = -3

Query: 246 MACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHT 67
           ++CG+ H  +VT  G++F++G+   G LGHG     + P+ ++TL G+    VACG +HT
Sbjct: 402 ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461

Query: 66  CAVTLA---------------GDLYSWGDGN 19
            A   A                 LY+WGDG+
Sbjct: 462 AAAVEAINELSDSGTSASPSSRKLYTWGDGD 492



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = -3

Query: 306 TMDSLLPKALESTMVLD-AQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNP 130
           T +  LP  +E  +     + +ACGS HV ++T + E+++WG+   G+LGHG     + P
Sbjct: 552 TANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTP 611

Query: 129 KLIQTLSGINIEMVACGEYHTCAVTL 52
            ++  L    ++ VACG   T  + +
Sbjct: 612 TIVDVLKDKQVKNVACGSKFTVVICI 637


>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1100

 Score =  184 bits (466), Expect = 9e-45
 Identities = 89/136 (65%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
 Frame = -3

Query: 405 EDIDFLGDVFIWXXXXXXXXXXXGVRKFHRS-GVTMDSLLPKALESTMVLDAQSMACGSR 229
           +D D LGDVFIW           G  +     GV +DSLLPKALEST+VLD Q++ACG R
Sbjct: 255 DDSDALGDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGGR 314

Query: 228 HVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHTCAVTLA 49
           H  LVT+QGE+FSWGEE GGRLGHGV++DV +PKLI +LS INIE+VACGEYHTCAVTL+
Sbjct: 315 HAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLS 374

Query: 48  GDLYSWGDGNFNSGLL 1
           GDLY+WGDG +N GLL
Sbjct: 375 GDLYTWGDGTYNFGLL 390



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
 Frame = -3

Query: 261 LDAQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVAC 82
           +   S++CG  H  +VT  G++F++G+   G LGHG    VS P+ +++L G+     AC
Sbjct: 411 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 470

Query: 81  GEYHTCAVT------------LAGDLYSWGDGN 19
           G +HT AV              +G L++WGDG+
Sbjct: 471 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 503



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -3

Query: 300 DSLLPKALESTMVLD-AQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKL 124
           D  LP  +E  +     + +ACG+ HV ++T + E+++WG+   GRLGHG   D + P L
Sbjct: 565 DGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSL 624

Query: 123 IQTLSGINIEMVACGEYHTCAVTLAGDLYSWGDG 22
           ++ L    ++ +ACG   T A+     L+ W  G
Sbjct: 625 VEALKDKQVKSIACGTNFTAAIC----LHKWVSG 654


>ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/136 (64%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
 Frame = -3

Query: 405 EDIDFLGDVFIWXXXXXXXXXXXGVRKFHRS-GVTMDSLLPKALESTMVLDAQSMACGSR 229
           +D D LGDVFIW           GV +   + GV MDSLLPKALES +VLD Q++ACG +
Sbjct: 263 DDGDALGDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGK 322

Query: 228 HVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHTCAVTLA 49
           H  LVT+QGE+FSWGEE GGRLGHGV++DV +PKLI++LS  NIE+VACGEYHTCAVTL+
Sbjct: 323 HAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLS 382

Query: 48  GDLYSWGDGNFNSGLL 1
           GDLY+WGDG +N GLL
Sbjct: 383 GDLYTWGDGTYNYGLL 398



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
 Frame = -3

Query: 261 LDAQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVAC 82
           +   S++CG  H  +VT  G++F++G+   G LGHG    VS P+ I++L G+     AC
Sbjct: 419 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAAC 478

Query: 81  GEYHTCAVT------------LAGDLYSWGDGN 19
           G +HT AV              +G L++WGDG+
Sbjct: 479 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 511



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -3

Query: 300 DSLLPKALESTMVLD-AQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKL 124
           D  LP  +E  +     + +ACG+ HV ++T + E+F+WG+   GRLGHG   D + P L
Sbjct: 572 DGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTL 631

Query: 123 IQTLSGINIEMVACGEYHTCAVTLAGDLYSWGDG 22
           ++ L    ++ +ACG   T A+     L+ W  G
Sbjct: 632 VEALKDKQVKSIACGTNFTAAIC----LHKWVSG 661


>ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/136 (63%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = -3

Query: 405 EDIDFLGDVFIWXXXXXXXXXXXGVRKFHRS-GVTMDSLLPKALESTMVLDAQSMACGSR 229
           +D D LGDVFIW           G R+   S    +DSLLPKALES +VLD Q++ACG+R
Sbjct: 259 DDCDALGDVFIWGEGTGEGVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNIACGNR 318

Query: 228 HVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVACGEYHTCAVTLA 49
           H  LVT+QGE+FSWGEEYGGRLGHG ++D  +PKLI  LS +NIE+VACGEYHTCAVTL+
Sbjct: 319 HAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLS 378

Query: 48  GDLYSWGDGNFNSGLL 1
           GDLY+WGDG +NSGLL
Sbjct: 379 GDLYTWGDGTYNSGLL 394



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
 Frame = -3

Query: 261 LDAQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKLIQTLSGINIEMVAC 82
           L   S++CG  H  LVT  G++F++G+   G LGHG    +S P+ +++L G+     AC
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAAC 474

Query: 81  GEYHTCAV------------TLAGDLYSWGDGN 19
           G +HT AV              +G L++WGDG+
Sbjct: 475 GVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGD 507



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -3

Query: 300 DSLLPKALESTMVLD-AQSMACGSRHVVLVTRQGEIFSWGEEYGGRLGHGVEADVSNPKL 124
           D  LP  +E  +     + +ACG+ HV ++T + E+++WG+   GRLGHG   D + P L
Sbjct: 569 DGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTL 628

Query: 123 IQTLSGINIEMVACGEYHTCAVTLAGDLYSWGDG 22
           ++ L    ++ +ACG   T A+     L+ W  G
Sbjct: 629 VEALKDKQVKSIACGTNFTAAIC----LHKWVSG 658