BLASTX nr result

ID: Bupleurum21_contig00034940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034940
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509806.1| mitochondrial carrier protein, putative [Ric...   155   3e-36
ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853...   154   5e-36
emb|CBI34669.3| unnamed protein product [Vitis vinifera]              154   5e-36
emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]   150   1e-34
ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32

>ref|XP_002509806.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223549705|gb|EEF51193.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 663

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/121 (61%), Positives = 91/121 (75%)
 Frame = +2

Query: 53  IEDNSKVEVCLLKRDIAGFARQEHAFAGAFAGIFVSLCLHPVDTIKTVTQSCRCDQKSIL 232
           ++D+  +     +R   G A+QEHA+AGAFAG+FVSLCLHPVDTIKTVTQS R +QKSI 
Sbjct: 345 VKDSMDIRALPCERPHYGLAKQEHAYAGAFAGVFVSLCLHPVDTIKTVTQSYRTEQKSIC 404

Query: 233 DISRSIITDRGLTGLYRGXXXXXXXXXXXXXVYTFTYESVKGALLPYFSKECHSLAHCVA 412
           DI RSI+++RG+TGLYRG             +YTFTYESVKG+LLP FSKE HSLAHC+A
Sbjct: 405 DIGRSIVSERGVTGLYRGIASNIASSAPISAIYTFTYESVKGSLLPLFSKEYHSLAHCIA 464

Query: 413 G 415
           G
Sbjct: 465 G 465


>ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853340 [Vitis vinifera]
          Length = 703

 Score =  154 bits (390), Expect = 5e-36
 Identities = 77/122 (63%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
 Frame = +2

Query: 56  EDNSKVEVCLLKRDIAGF--ARQEHAFAGAFAGIFVSLCLHPVDTIKTVTQSCRCDQKSI 229
           +D  K+E C  K+D   +  A+QEHAFAGAFAG+FVSLCLHPVDTIKTV QSC+ DQKSI
Sbjct: 337 KDKLKMETCPSKQDKHHYVLAKQEHAFAGAFAGVFVSLCLHPVDTIKTVIQSCQADQKSI 396

Query: 230 LDISRSIITDRGLTGLYRGXXXXXXXXXXXXXVYTFTYESVKGALLPYFSKECHSLAHCV 409
             + R II+ RGL G YRG             VYTFTYESVKGALLP F KECHS+AHC+
Sbjct: 397 FSVGRLIISQRGLAGFYRGITSNIASSAPISAVYTFTYESVKGALLPLFPKECHSIAHCM 456

Query: 410 AG 415
           AG
Sbjct: 457 AG 458


>emb|CBI34669.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  154 bits (390), Expect = 5e-36
 Identities = 77/122 (63%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
 Frame = +2

Query: 56  EDNSKVEVCLLKRDIAGF--ARQEHAFAGAFAGIFVSLCLHPVDTIKTVTQSCRCDQKSI 229
           +D  K+E C  K+D   +  A+QEHAFAGAFAG+FVSLCLHPVDTIKTV QSC+ DQKSI
Sbjct: 289 KDKLKMETCPSKQDKHHYVLAKQEHAFAGAFAGVFVSLCLHPVDTIKTVIQSCQADQKSI 348

Query: 230 LDISRSIITDRGLTGLYRGXXXXXXXXXXXXXVYTFTYESVKGALLPYFSKECHSLAHCV 409
             + R II+ RGL G YRG             VYTFTYESVKGALLP F KECHS+AHC+
Sbjct: 349 FSVGRLIISQRGLAGFYRGITSNIASSAPISAVYTFTYESVKGALLPLFPKECHSIAHCM 408

Query: 410 AG 415
           AG
Sbjct: 409 AG 410


>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score =  150 bits (379), Expect = 1e-34
 Identities = 75/119 (63%), Positives = 85/119 (71%), Gaps = 2/119 (1%)
 Frame = +2

Query: 59   DNSKVEVCLLKRDIAGF--ARQEHAFAGAFAGIFVSLCLHPVDTIKTVTQSCRCDQKSIL 232
            D  K+E C  K+D   +  A+QEHAFAGAFAG+FVSLCLHPVDTIKTV QSC+ DQKSI 
Sbjct: 1447 DKLKMETCPSKQDKHHYVLAKQEHAFAGAFAGVFVSLCLHPVDTIKTVIQSCQADQKSIF 1506

Query: 233  DISRSIITDRGLTGLYRGXXXXXXXXXXXXXVYTFTYESVKGALLPYFSKECHSLAHCV 409
             + R II+ RGL G YRG             VYTFTYESVKGALLP F KECHS+AHC+
Sbjct: 1507 SVGRLIISQRGLAGFYRGITSNIASSAPISAVYTFTYESVKGALLPLFPKECHSIAHCM 1565


>ref|XP_002304496.1| predicted protein [Populus trichocarpa] gi|222841928|gb|EEE79475.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/116 (57%), Positives = 84/116 (72%)
 Frame = +2

Query: 68  KVEVCLLKRDIAGFARQEHAFAGAFAGIFVSLCLHPVDTIKTVTQSCRCDQKSILDISRS 247
           +++    +R     A+QEHAFAGAFAGIFVSL LHP+DT+KT+ QSC  +QKSI  I RS
Sbjct: 332 QIQSSACERPQYALAKQEHAFAGAFAGIFVSLSLHPIDTVKTIIQSCPAEQKSISFIGRS 391

Query: 248 IITDRGLTGLYRGXXXXXXXXXXXXXVYTFTYESVKGALLPYFSKECHSLAHCVAG 415
           I+++RG+TGLYRG             +YTFTYESVKG+LLP+F KE HS AHC+AG
Sbjct: 392 IVSERGMTGLYRGIGSNIASSAPISAIYTFTYESVKGSLLPHFPKEHHSFAHCIAG 447


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