BLASTX nr result

ID: Bupleurum21_contig00034936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034936
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631637.1| PREDICTED: uncharacterized protein LOC100852...    57   1e-06
ref|XP_002313803.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_003631637.1| PREDICTED: uncharacterized protein LOC100852891 [Vitis vinifera]
           gi|297741437|emb|CBI32568.3| unnamed protein product
           [Vitis vinifera]
          Length = 133

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = -3

Query: 360 LSDARRGPEEYWKSIMNEKPIPEVLKDLIDQHEA-YQSDGRQNLQKYGHSLNMNHFTRDF 184
           L D R+   +YWKSIM  +P+PE +K  I Q  A + S  R+          M+HF RDF
Sbjct: 27  LIDGRKDMGDYWKSIMKGQPMPEAIKGFIHQDPASFSSKARK----------MDHFVRDF 76

Query: 183 GTKPNLIIYRSGMNTQVFREDVKLDMTPRWKKNN--LKHVKLRLN 55
             +PN IIY  G   +   + + ++M P  KK    ++ V LR+N
Sbjct: 77  DARPNNIIYH-GHVERKGEKPLGVEMKPELKKEKFFVEPVNLRVN 120


>ref|XP_002313803.1| predicted protein [Populus trichocarpa]
           gi|224105425|ref|XP_002313806.1| predicted protein
           [Populus trichocarpa] gi|222850211|gb|EEE87758.1|
           predicted protein [Populus trichocarpa]
           gi|222850214|gb|EEE87761.1| predicted protein [Populus
           trichocarpa]
          Length = 102

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
 Frame = -3

Query: 360 LSDARRGPEE-YWKSIMNEKPIPEVLKDLIDQHEAYQSDGRQNLQKYGHSLNMNHFTRDF 184
           L+ AR+ P E YWKS+  ++PIP  ++DL  Q  A  +D             MNHF +DF
Sbjct: 19  LNHARKEPRENYWKSMTKDQPIPGAIRDLFVQDPAAGAD------------KMNHFVKDF 66

Query: 183 GTKPNLIIYRSGMNTQVFREDVKLDMTPRW 94
            TK N IIY S    ++ +E   ++ T  W
Sbjct: 67  DTKHNAIIYHSHEKDKL-KEKKSMNPTNTW 95