BLASTX nr result

ID: Bupleurum21_contig00034933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034933
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855...   128   6e-28
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   128   6e-28
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   128   6e-28
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   127   7e-28
ref|XP_004137293.1| PREDICTED: uncharacterized mitochondrial pro...   127   1e-27

>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
          Length = 1011

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/116 (54%), Positives = 75/116 (64%)
 Frame = +3

Query: 3    PTTLHLDVLQHTLRYISQTAGQGILL*SSNHLTLQAFSDSDWASCPDSRRSITGYVLLFG 182
            P   HLD     LRY+ QT GQGI L S+  L L A+ D+DWA C D+RRS TGY + FG
Sbjct: 814  PRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRSTTGYCIFFG 873

Query: 183  KSHISWKSKKQSTVSRSSYEAEYRVMAAAASEVTWIVRLLHELGVHDLEPVTLHCD 350
             + ISWK+KKQ TVSRSS EAEYR MA    E+TW+  LL +L V+    V L CD
Sbjct: 874  NAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVKLFCD 929


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/116 (54%), Positives = 75/116 (64%)
 Frame = +3

Query: 3    PTTLHLDVLQHTLRYISQTAGQGILL*SSNHLTLQAFSDSDWASCPDSRRSITGYVLLFG 182
            P   HLD     LRY+ QT GQGI L S+  L L A+ D+DWA C D+RRS TGY + FG
Sbjct: 1287 PRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRSTTGYCIFFG 1346

Query: 183  KSHISWKSKKQSTVSRSSYEAEYRVMAAAASEVTWIVRLLHELGVHDLEPVTLHCD 350
             + ISWK+KKQ TVSRSS EAEYR MA    E+TW+  LL +L V+    V L CD
Sbjct: 1347 NAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVKLFCD 1402


>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/116 (54%), Positives = 75/116 (64%)
 Frame = +3

Query: 3   PTTLHLDVLQHTLRYISQTAGQGILL*SSNHLTLQAFSDSDWASCPDSRRSITGYVLLFG 182
           P + HL+   HTLRYI    G GI L S     L  F D+DWASCPDSRRSI+G+ L  G
Sbjct: 195 PRSGHLEAAYHTLRYIRNNPGLGIFLSSEQSFQLTGFCDADWASCPDSRRSISGFFLTMG 254

Query: 183 KSHISWKSKKQSTVSRSSYEAEYRVMAAAASEVTWIVRLLHELGVHDLEPVTLHCD 350
              +SWKSKKQ  VS SS EAEYR +    +E+ WIVRLLH+L V    PV++HCD
Sbjct: 255 GCPLSWKSKKQQVVSLSSAEAEYRSLRRLVAEIAWIVRLLHDLSVDFSLPVSVHCD 310


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/116 (53%), Positives = 79/116 (68%)
 Frame = +3

Query: 3    PTTLHLDVLQHTLRYISQTAGQGILL*SSNHLTLQAFSDSDWASCPDSRRSITGYVLLFG 182
            P   HL  +   L+YI  + G+GI   +S+ L L+AFSDSDWA+CPDSR+S+TG+ +  G
Sbjct: 821  PRRPHLQAVYRILQYIKGSPGKGIFFSASSSLQLKAFSDSDWAACPDSRKSVTGFCIFLG 880

Query: 183  KSHISWKSKKQSTVSRSSYEAEYRVMAAAASEVTWIVRLLHELGVHDLEPVTLHCD 350
             S ISWKSKKQ TVSRSS EAEYR MA    E+TW + LL +LGV   +   L+CD
Sbjct: 881  DSLISWKSKKQRTVSRSSAEAEYRAMAHVTCELTWFISLLKDLGVPHTQLALLYCD 936


>ref|XP_004137293.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Cucumis sativus] gi|449472533|ref|XP_004153623.1|
           PREDICTED: uncharacterized mitochondrial protein
           AtMg00810-like [Cucumis sativus]
           gi|449473152|ref|XP_004153801.1| PREDICTED:
           uncharacterized mitochondrial protein AtMg00810-like
           [Cucumis sativus]
          Length = 234

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/116 (50%), Positives = 76/116 (65%)
 Frame = +3

Query: 3   PTTLHLDVLQHTLRYISQTAGQGILL*SSNHLTLQAFSDSDWASCPDSRRSITGYVLLFG 182
           P   H+D   H LRYI  + GQGI +  ++ L+ QAF D+DW SCPD+RRS+TG+ +  G
Sbjct: 52  PDKTHMDAANHLLRYIKGSPGQGIFMAKTDDLSFQAFVDADWGSCPDTRRSVTGFCVFLG 111

Query: 183 KSHISWKSKKQSTVSRSSYEAEYRVMAAAASEVTWIVRLLHELGVHDLEPVTLHCD 350
           KS ISWKSKK+ T+SRSS EAEYR +A    EV W+  LL EL +    P  + CD
Sbjct: 112 KSLISWKSKKEQTLSRSSAEAEYRALATLCCEVIWLQSLLRELKIAVRSPAAVFCD 167


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