BLASTX nr result

ID: Bupleurum21_contig00034932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034932
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302027.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002306875.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002510405.1| oxidoreductase, putative [Ricinus communis] ...   144   7e-33
gb|AAG12682.1|AC025814_6 unknown protein; 18270-16126 [Arabidops...   120   9e-26
ref|NP_683496.2| oxidoreductase [Arabidopsis thaliana] gi|110741...   120   9e-26

>ref|XP_002302027.1| predicted protein [Populus trichocarpa] gi|222843753|gb|EEE81300.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/154 (52%), Positives = 111/154 (72%), Gaps = 9/154 (5%)
 Frame = -2

Query: 451 GAYRQKPVVSNREGISMQREIKNDISKLTHKMTMEQ------GKPVSVITLVGENKGAAM 290
           G   QK  +S+ E + +Q+EI+ DISK  H + ME        KPVSV+TL GEN+GA M
Sbjct: 326 GESHQKTSMSSGEKVPLQKEIREDISKFVHNLGMEHMEHPIGEKPVSVVTLAGENRGATM 385

Query: 289 QLGSE---KEGTVHIHRGYKLNPGESAEATTNGEESSKPKRPKEANSKEDQMTKAYMNSN 119
            +GSE   K+G+VHIHRGYK+NP ES+EATT+GE SS+ +  K+  +KED   KAY+NSN
Sbjct: 386 YVGSESSRKDGSVHIHRGYKINPDESSEATTDGEGSSRGRSSKDLLTKEDPARKAYINSN 445

Query: 118 SQGINNSIVFHSSITERNPGVHLSLTHDPTEPDK 17
           +Q +NNSI+F +S++ER+PGV LSL+++  EP K
Sbjct: 446 TQSVNNSILFETSVSERSPGVQLSLSYNHEEPSK 479


>ref|XP_002306875.1| predicted protein [Populus trichocarpa] gi|222856324|gb|EEE93871.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/154 (51%), Positives = 106/154 (68%), Gaps = 9/154 (5%)
 Frame = -2

Query: 451 GAYRQKPVVSNREGISMQREIKNDISKLTHKMTMEQ------GKPVSVITLVGENKGAAM 290
           G   QK  +SN E + + +EI+ DISK  HK+ ME        KPVS++TL GEN+GA+M
Sbjct: 362 GESHQKSSMSNGEKVPLHKEIREDISKFVHKLGMEHIKHPIGEKPVSIVTLAGENRGASM 421

Query: 289 QLGSE---KEGTVHIHRGYKLNPGESAEATTNGEESSKPKRPKEANSKEDQMTKAYMNSN 119
             GSE   K+G+VHIH GYK+NP ES+E  T+GE SSK  + K+  +KED   KAY+NSN
Sbjct: 422 YEGSEPTRKDGSVHIHHGYKINPDESSENPTDGEGSSKGGKFKDLLTKEDPAMKAYINSN 481

Query: 118 SQGINNSIVFHSSITERNPGVHLSLTHDPTEPDK 17
           +Q +NNSI+F SS+ ER+PGV L L+H+  EP +
Sbjct: 482 TQSVNNSILFESSLNERSPGVQLHLSHNDEEPSE 515


>ref|XP_002510405.1| oxidoreductase, putative [Ricinus communis]
           gi|223551106|gb|EEF52592.1| oxidoreductase, putative
           [Ricinus communis]
          Length = 551

 Score =  144 bits (363), Expect = 7e-33
 Identities = 77/166 (46%), Positives = 110/166 (66%), Gaps = 11/166 (6%)
 Frame = -2

Query: 481 ASHQSDKNMEGAYRQKPVVSNREGISMQREIKNDISKLTHKMTMEQ------GKPVSVIT 320
           A+H   +N      QKP +SN E + + + I++DISK  HK+ + Q       KPV V+T
Sbjct: 317 ATHPKARNKSTESHQKPSMSNGEHVPLHKGIRDDISKFIHKLGIGQVKYPVDEKPVCVMT 376

Query: 319 LVGENKGAAMQLGSE---KEGTVHIHRGYKLNPGESAEATTNGEES--SKPKRPKEANSK 155
           + GEN GA+M +G+E   K+G++HIHRGYKLNP +S  ATT+GE S   + K P    +K
Sbjct: 377 IAGENTGASMHVGAEPARKDGSIHIHRGYKLNPDDSTGATTDGEGSRDGRSKNP----TK 432

Query: 154 EDQMTKAYMNSNSQGINNSIVFHSSITERNPGVHLSLTHDPTEPDK 17
           E  +TKAY+NSN+Q +NNSI+  SS+ E++PGVHL+L+H+  E  K
Sbjct: 433 EVPVTKAYLNSNTQSVNNSIILDSSVNEQDPGVHLALSHNLAESSK 478


>gb|AAG12682.1|AC025814_6 unknown protein; 18270-16126 [Arabidopsis thaliana]
          Length = 593

 Score =  120 bits (302), Expect = 9e-26
 Identities = 73/152 (48%), Positives = 93/152 (61%), Gaps = 8/152 (5%)
 Frame = -2

Query: 478 SHQSDKNMEGAYRQKPVVSNREGIS-MQREIKNDI----SKLTHKMTMEQGKPVSVITLV 314
           +HQ  K    +    P V+NREG S M R+IK DI    SKLT   +    K VSV TL 
Sbjct: 290 NHQKTKGALTSNLGNPRVTNREGSSSMSRKIKEDIRDGISKLTWGKSNGDDKSVSVYTLT 349

Query: 313 GENKGAAMQLGSEKE---GTVHIHRGYKLNPGESAEATTNGEESSKPKRPKEANSKEDQM 143
           GENKGA M +GSEK+   G VHI RGY+ NP ES+  T    E+     PK+  ++E+  
Sbjct: 350 GENKGATMGIGSEKDKKDGEVHIRRGYRSNPDESSNTTATETEN-----PKDDEAEEEAS 404

Query: 142 TKAYMNSNSQGINNSIVFHSSITERNPGVHLS 47
             AY+N N+QGINNSIV  SS++E +PGVH+S
Sbjct: 405 FTAYINGNTQGINNSIVVESSVSENDPGVHMS 436


>ref|NP_683496.2| oxidoreductase [Arabidopsis thaliana] gi|110741590|dbj|BAE98743.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197574|gb|AEE35695.1| oxidoreductase [Arabidopsis
           thaliana]
          Length = 513

 Score =  120 bits (302), Expect = 9e-26
 Identities = 73/152 (48%), Positives = 93/152 (61%), Gaps = 8/152 (5%)
 Frame = -2

Query: 478 SHQSDKNMEGAYRQKPVVSNREGIS-MQREIKNDI----SKLTHKMTMEQGKPVSVITLV 314
           +HQ  K    +    P V+NREG S M R+IK DI    SKLT   +    K VSV TL 
Sbjct: 290 NHQKTKGALTSNLGNPRVTNREGSSSMSRKIKEDIRDGISKLTWGKSNGDDKSVSVYTLT 349

Query: 313 GENKGAAMQLGSEKE---GTVHIHRGYKLNPGESAEATTNGEESSKPKRPKEANSKEDQM 143
           GENKGA M +GSEK+   G VHI RGY+ NP ES+  T    E+     PK+  ++E+  
Sbjct: 350 GENKGATMGIGSEKDKKDGEVHIRRGYRSNPDESSNTTATETEN-----PKDDEAEEEAS 404

Query: 142 TKAYMNSNSQGINNSIVFHSSITERNPGVHLS 47
             AY+N N+QGINNSIV  SS++E +PGVH+S
Sbjct: 405 FTAYINGNTQGINNSIVVESSVSENDPGVHMS 436


Top