BLASTX nr result

ID: Bupleurum21_contig00034910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034910
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indi...   114   6e-24
emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group] gi|222628...   114   6e-24
emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]        114   6e-24
ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [S...   112   4e-23

>ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 664

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/105 (50%), Positives = 75/105 (71%)
 Frame = +2

Query: 2   DSDTMVKSSIISMYSKCGLMNDSVLVFKKTEYMDTVVWNSIIVAQAYNGAATEALKLFHL 181
           + D +V SS+ISMYSKCGL+ ++  VFK     DTV WN++I   AY+G A+EALKLF+ 
Sbjct: 416 EHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASEALKLFNK 475

Query: 182 MIQYGYKPNNVTFLGLLVACSHSGMVDEGLNYFMAMERDWNLIPK 316
           M + G++P++ TFL +L AC+H G + EG  YF +M+ DWNL P+
Sbjct: 476 MTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPR 520


>gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
          Length = 655

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/105 (47%), Positives = 76/105 (72%)
 Frame = +2

Query: 2   DSDTMVKSSIISMYSKCGLMNDSVLVFKKTEYMDTVVWNSIIVAQAYNGAATEALKLFHL 181
           + D +V SS+ISMYSKCGL++++  VF+     DTV WN++I   AY+G A EALK+F +
Sbjct: 407 EHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDM 466

Query: 182 MIQYGYKPNNVTFLGLLVACSHSGMVDEGLNYFMAMERDWNLIPK 316
           M + G++P++ TFL +L AC+H G + EG  +F +M+ DWNL+P+
Sbjct: 467 MTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPR 511


>emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group] gi|222628896|gb|EEE61028.1|
           hypothetical protein OsJ_14863 [Oryza sativa Japonica
           Group]
          Length = 655

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/105 (47%), Positives = 76/105 (72%)
 Frame = +2

Query: 2   DSDTMVKSSIISMYSKCGLMNDSVLVFKKTEYMDTVVWNSIIVAQAYNGAATEALKLFHL 181
           + D +V SS+ISMYSKCGL++++  VF+     DTV WN++I   AY+G A EALK+F +
Sbjct: 407 EHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDM 466

Query: 182 MIQYGYKPNNVTFLGLLVACSHSGMVDEGLNYFMAMERDWNLIPK 316
           M + G++P++ TFL +L AC+H G + EG  +F +M+ DWNL+P+
Sbjct: 467 MTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPR 511


>emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
          Length = 729

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/105 (47%), Positives = 76/105 (72%)
 Frame = +2

Query: 2   DSDTMVKSSIISMYSKCGLMNDSVLVFKKTEYMDTVVWNSIIVAQAYNGAATEALKLFHL 181
           + D +V SS+ISMYSKCGL++++  VF+     DTV WN++I   AY+G A EALK+F +
Sbjct: 407 EHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEALKVFDM 466

Query: 182 MIQYGYKPNNVTFLGLLVACSHSGMVDEGLNYFMAMERDWNLIPK 316
           M + G++P++ TFL +L AC+H G + EG  +F +M+ DWNL+P+
Sbjct: 467 MTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPR 511


>ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
           gi|241933076|gb|EES06221.1| hypothetical protein
           SORBIDRAFT_04g002445 [Sorghum bicolor]
          Length = 603

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/105 (48%), Positives = 73/105 (69%)
 Frame = +2

Query: 2   DSDTMVKSSIISMYSKCGLMNDSVLVFKKTEYMDTVVWNSIIVAQAYNGAATEALKLFHL 181
           + D +V SS+ISMYSKCGL+ ++  VF      DTV WN++I   AY+G A EAL LF  
Sbjct: 366 ERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDR 425

Query: 182 MIQYGYKPNNVTFLGLLVACSHSGMVDEGLNYFMAMERDWNLIPK 316
           M + G+ P++ TFL +L AC+H G + EG ++F +M++DWNLIP+
Sbjct: 426 MTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPR 470


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