BLASTX nr result

ID: Bupleurum21_contig00034907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034907
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cuc...    92   6e-17
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...    85   5e-15
ref|XP_002308716.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002512603.1| conserved hypothetical protein [Ricinus comm...    84   2e-14

>ref|XP_004138901.1| PREDICTED: F-box protein At2g02240-like [Cucumis sativus]
           gi|449477769|ref|XP_004155117.1| PREDICTED: F-box
           protein At2g02240-like [Cucumis sativus]
          Length = 322

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 37/76 (48%), Positives = 54/76 (71%)
 Frame = -2

Query: 314 ESRFGDVIELIHVCWFHINGKINTSLLSPDTVYTTYLVYKPSVHIYGFKDQPIDISVGIN 135
           E+RFG+V EL+ VCW  I GKI T +LSP T+Y+ +LV+KP+   YGF+ QP+++ VG+ 
Sbjct: 143 EARFGEVAELVSVCWLEIRGKIETEMLSPGTLYSAHLVFKPTTSSYGFQQQPVEVGVGLT 202

Query: 134 GEESINRIIYLEPKGR 87
           G E + R +YL+   R
Sbjct: 203 GTEPVKRTVYLDDVSR 218


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
 Frame = -2

Query: 323 SDYESRFGDVIELIHVCWFHINGKINTSLLSPDTVYTTYLVYKPSVHIYGFKDQPIDISV 144
           SD  SRFG+V ELI VCW  I GKIN ++LSP T+YT YLV++P+  +YG   QP+++ V
Sbjct: 135 SDPSSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYGLDYQPVEVGV 194

Query: 143 GINGEESINRIIYLE-PKGRVQ 81
           G+ G E   R +YL+  +GR Q
Sbjct: 195 GLVGSECGMRNVYLDSERGRRQ 216


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/75 (52%), Positives = 51/75 (68%)
 Frame = -2

Query: 323 SDYESRFGDVIELIHVCWFHINGKINTSLLSPDTVYTTYLVYKPSVHIYGFKDQPIDISV 144
           SD  SRFG+V ELI VCW  I GKIN ++LSP T+Y  YLV+KP    YG   QP+++ V
Sbjct: 124 SDSSSRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGV 183

Query: 143 GINGEESINRIIYLE 99
           G+ G E+  R +YL+
Sbjct: 184 GLVGSENGKRNVYLD 198


>ref|XP_002308716.1| predicted protein [Populus trichocarpa] gi|222854692|gb|EEE92239.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 323 SDYESRFGDVIELIHVCWFHINGKINTSLLSPDTVYTTYLVYKPS--VHIYGFKDQPIDI 150
           SD  SRF +V ELI VCW  I+GKINTS+LSP T+YT YLV K S  +H YG  DQP+ +
Sbjct: 131 SDPTSRFPEVAELISVCWLEISGKINTSMLSPATLYTAYLVLKLSIDIHNYGLDDQPVAV 190

Query: 149 SVGINGEESINRII 108
           ++ ++GEES  R +
Sbjct: 191 AMKLDGEESYTRTV 204


>ref|XP_002512603.1| conserved hypothetical protein [Ricinus communis]
           gi|223548564|gb|EEF50055.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/83 (44%), Positives = 54/83 (65%)
 Frame = -2

Query: 323 SDYESRFGDVIELIHVCWFHINGKINTSLLSPDTVYTTYLVYKPSVHIYGFKDQPIDISV 144
           S+ +SRF +V ELI VCW  I GKI+  +LSP+T+Y  Y VYK +   YGF  QP++++V
Sbjct: 135 SELKSRFEEVAELIGVCWLEICGKISARMLSPETLYAAYFVYKTTAGAYGFDHQPVEVTV 194

Query: 143 GINGEESINRIIYLEPKGRVQSK 75
           G+ G E   R +YL+ +   Q +
Sbjct: 195 GLAGTEGCKRSVYLDAERERQQR 217