BLASTX nr result

ID: Bupleurum21_contig00034895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034895
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...    70   2e-15
emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]    70   2e-15
emb|CBI16432.3| unnamed protein product [Vitis vinifera]               70   2e-15
ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatul...    62   3e-12
ref|XP_002513447.1| conserved hypothetical protein [Ricinus comm...    62   3e-11

>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score = 70.5 bits (171), Expect(2) = 2e-15
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
 Frame = +3

Query: 39   YISICLYNTSLEKLC-----TSWIILAELPDFINLC-SPLAWLLCKFSTCISVSFFGNSF 200
            Y+S+  + + L   C     TSW     L   I+L  +PLAWLLC FSTCI +++ GNSF
Sbjct: 1227 YLSVSAFISLLSTCCNLIDGTSW-----LDYLISLAFAPLAWLLCIFSTCICIAYLGNSF 1281

Query: 201  LQPNYALSPEIRTI*SDEFVKY 266
            LQPNYAL+PEI +I S +FVK+
Sbjct: 1282 LQPNYALTPEI-SIWSKDFVKW 1302



 Score = 36.2 bits (82), Expect(2) = 2e-15
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +2

Query: 290  VQQASSNVLAVHLRGTIFAKYW 355
            VQ+ +S VLAVHLRGT+F K W
Sbjct: 1308 VQEVASKVLAVHLRGTVFLKCW 1329


>emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]
          Length = 2246

 Score = 70.5 bits (171), Expect(2) = 2e-15
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
 Frame = +3

Query: 39   YISICLYNTSLEKLC-----TSWIILAELPDFINLC-SPLAWLLCKFSTCISVSFFGNSF 200
            Y+S+  + + L   C     TSW     L   I+L  +PLAWLLC FSTCI +++ GNSF
Sbjct: 1251 YLSVSAFISLLSTCCNLIDGTSW-----LDYLISLAFAPLAWLLCIFSTCICIAYLGNSF 1305

Query: 201  LQPNYALSPEIRTI*SDEFVKY 266
            LQPNYAL+PEI +I S +FVK+
Sbjct: 1306 LQPNYALTPEI-SIWSKDFVKW 1326



 Score = 36.2 bits (82), Expect(2) = 2e-15
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +2

Query: 290  VQQASSNVLAVHLRGTIFAKYW 355
            VQ+ +S VLAVHLRGT+F K W
Sbjct: 1332 VQEVASKVLAVHLRGTVFLKCW 1353


>emb|CBI16432.3| unnamed protein product [Vitis vinifera]
          Length = 2221

 Score = 70.5 bits (171), Expect(2) = 2e-15
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
 Frame = +3

Query: 39   YISICLYNTSLEKLC-----TSWIILAELPDFINLC-SPLAWLLCKFSTCISVSFFGNSF 200
            Y+S+  + + L   C     TSW     L   I+L  +PLAWLLC FSTCI +++ GNSF
Sbjct: 1156 YLSVSAFISLLSTCCNLIDGTSW-----LDYLISLAFAPLAWLLCIFSTCICIAYLGNSF 1210

Query: 201  LQPNYALSPEIRTI*SDEFVKY 266
            LQPNYAL+PEI +I S +FVK+
Sbjct: 1211 LQPNYALTPEI-SIWSKDFVKW 1231



 Score = 36.2 bits (82), Expect(2) = 2e-15
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +2

Query: 290  VQQASSNVLAVHLRGTIFAKYW 355
            VQ+ +S VLAVHLRGT+F K W
Sbjct: 1237 VQEVASKVLAVHLRGTVFLKCW 1258


>ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatula]
            gi|355486526|gb|AES67729.1| Bifunctional protein aas
            [Medicago truncatula]
          Length = 2339

 Score = 62.0 bits (149), Expect(2) = 3e-12
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +3

Query: 132  SPLAWLLCKFSTCISVSFFGNSFLQPNYALSPEIRTI*SDEFVKY 266
            +PL+W+LC  STCI +SFFGNSFL+PNYAL+PE+ +I S  FVK+
Sbjct: 1290 APLSWILCIASTCICISFFGNSFLRPNYALTPEM-SIYSIAFVKW 1333



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 293  QQASSNVLAVHLRGTIFAKYW 355
            Q+ SS VLA HL+GT+F  YW
Sbjct: 1340 QEISSKVLATHLKGTVFLNYW 1360


>ref|XP_002513447.1| conserved hypothetical protein [Ricinus communis]
            gi|223547355|gb|EEF48850.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2278

 Score = 62.0 bits (149), Expect(2) = 3e-11
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +3

Query: 39   YISICLYNTSLEKLCTSWIILAELPDFINLCS-PLAWLLCKFSTCISVSFFGNSFLQPNY 215
            Y+S+  + + +    TS   +      I+L S PLAW+LC  STCIS++F GNSFL+PNY
Sbjct: 1212 YLSVSAFTSLISASHTSADKVHWSAYLISLASAPLAWVLCIVSTCISIAFLGNSFLRPNY 1271

Query: 216  ALSPEIRTI*SDEFVKY 266
            AL+P+  +I S +FVK+
Sbjct: 1272 ALTPK-TSIWSTDFVKW 1287



 Score = 30.8 bits (68), Expect(2) = 3e-11
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +2

Query: 293  QQASSNVLAVHLRGTIFAKYW 355
            Q+ SS V A HLRGT F  YW
Sbjct: 1294 QEISSKVFAEHLRGTPFLNYW 1314


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