BLASTX nr result

ID: Bupleurum21_contig00034888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034888
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26124.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...   138   5e-31
ref|XP_002314472.1| hypothetical protein POPTRDRAFT_565767 [Popu...   130   9e-29
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...   129   2e-28
gb|AAX22009.1| SPLAYED splice variant [Arabidopsis thaliana]          124   1e-26

>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = -2

Query: 265  IQREKINLLKINDVEGYLRMVKDAKSDRVKQLLKETEKYLQKLGSKLRDAKVMNRCFDKD 86
            IQREKINLLKINDVEGYLRMV+DAKSDRVKQLLKETEKYLQKLGSKL++AK M R F+ D
Sbjct: 931  IQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMTRHFEVD 990

Query: 85   IDDTHSAGVMETNEVPIDNEDETDQAKH 2
            +D+  +A V+E NE  +DNEDE+DQAKH
Sbjct: 991  MDENRTANVVEKNETAVDNEDESDQAKH 1018


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
            gi|223543945|gb|EEF45471.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3502

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/88 (78%), Positives = 77/88 (87%)
 Frame = -2

Query: 265  IQREKINLLKINDVEGYLRMVKDAKSDRVKQLLKETEKYLQKLGSKLRDAKVMNRCFDKD 86
            IQREKINLLKINDVEGYLRMV+DAKSDRVKQLLKETEKYLQKLGSKL+DAKVM + F+ D
Sbjct: 880  IQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQDAKVMAKRFEND 939

Query: 85   IDDTHSAGVMETNEVPIDNEDETDQAKH 2
            +D+T  A  +E NE   DNEDE+DQAKH
Sbjct: 940  MDETRIATTVEKNEAAFDNEDESDQAKH 967


>ref|XP_002314472.1| hypothetical protein POPTRDRAFT_565767 [Populus trichocarpa]
           gi|222863512|gb|EEF00643.1| hypothetical protein
           POPTRDRAFT_565767 [Populus trichocarpa]
          Length = 559

 Score =  130 bits (328), Expect = 9e-29
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = -2

Query: 265 IQREKINLLKINDVEGYLRMVKDAKSDRVKQLLKETEKYLQKLGSKLRDAKVMNRCFDKD 86
           IQREKINLLKINDVEGYLRMV+DAKSDRVKQLLKETEKYLQKLGSKL++AK M   F+ D
Sbjct: 88  IQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMASRFEND 147

Query: 85  IDDTHSAGVMETNEVPIDNEDETDQAK 5
           +D++  A V+E NE  ++NEDE+DQAK
Sbjct: 148 MDESRHAAVVEKNETSVENEDESDQAK 174


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851625|gb|EEE89172.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 3427

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = -2

Query: 265  IQREKINLLKINDVEGYLRMVKDAKSDRVKQLLKETEKYLQKLGSKLRDAKVMNRCFDKD 86
            IQREKINLLKINDVEGYLRMV+DAKSDRVKQLLKETEKYLQKLGSKL++AK M   F+ D
Sbjct: 896  IQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLQEAKSMASRFEND 955

Query: 85   IDDTHSAGVMETNEVPIDNEDETDQAK 5
            +D++ +A V+E NE   +NEDE+DQAK
Sbjct: 956  MDESRTATVVEKNETAAENEDESDQAK 982


>gb|AAX22009.1| SPLAYED splice variant [Arabidopsis thaliana]
          Length = 3543

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/88 (70%), Positives = 76/88 (86%)
 Frame = -2

Query: 265 IQREKINLLKINDVEGYLRMVKDAKSDRVKQLLKETEKYLQKLGSKLRDAKVMNRCFDKD 86
           IQREKINLLKINDVEGYLRMV+DAKSDRVKQLLKETEKYLQKLGSKL++AK++   F+ +
Sbjct: 637 IQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKLGSKLKEAKLLTSRFENE 696

Query: 85  IDDTHSAGVMETNEVPIDNEDETDQAKH 2
            D+T ++   + +E  I+NEDE+DQAKH
Sbjct: 697 ADETRTSNATD-DETLIENEDESDQAKH 723


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