BLASTX nr result

ID: Bupleurum21_contig00034886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034886
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT80327.1| UDP-D-glucuronate decarboxylase [Hordeum vulgare]       65   8e-09
dbj|BAI66424.1| UDP-D-glucuronate decarboxylase [Triticum aestivum]    64   1e-08
ref|XP_002440972.1| hypothetical protein SORBIDRAFT_09g018070 [S...    64   1e-08
ref|NP_182287.1| UDP-xylose synthase 4 [Arabidopsis thaliana] gi...    64   2e-08
ref|NP_001055318.1| Os05g0363200 [Oryza sativa Japonica Group] g...    64   2e-08

>gb|AAT80327.1| UDP-D-glucuronate decarboxylase [Hordeum vulgare]
          Length = 400

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 280 VEG*MRLMEGDHVGPFNLGNPGEFTMLELARV 375
           VEG MRLMEGDH+GPFNLGNPGEFTMLELA+V
Sbjct: 297 VEGLMRLMEGDHIGPFNLGNPGEFTMLELAKV 328


>dbj|BAI66424.1| UDP-D-glucuronate decarboxylase [Triticum aestivum]
          Length = 271

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 280 VEG*MRLMEGDHVGPFNLGNPGEFTMLELARV 375
           VEG M+LMEGDHVGPFNLGNPGEFTMLELA+V
Sbjct: 167 VEGLMKLMEGDHVGPFNLGNPGEFTMLELAKV 198


>ref|XP_002440972.1| hypothetical protein SORBIDRAFT_09g018070 [Sorghum bicolor]
           gi|241946257|gb|EES19402.1| hypothetical protein
           SORBIDRAFT_09g018070 [Sorghum bicolor]
          Length = 445

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 280 VEG*MRLMEGDHVGPFNLGNPGEFTMLELARV 375
           VEG M+LMEGDHVGPFNLGNPGEFTMLELA+V
Sbjct: 341 VEGLMKLMEGDHVGPFNLGNPGEFTMLELAKV 372


>ref|NP_182287.1| UDP-xylose synthase 4 [Arabidopsis thaliana]
           gi|20196965|gb|AAM14846.1| putative dTDP-glucose
           4-6-dehydratase [Arabidopsis thaliana]
           gi|63003798|gb|AAY25428.1| At2g47650 [Arabidopsis
           thaliana] gi|222422947|dbj|BAH19459.1| AT2G47650
           [Arabidopsis thaliana] gi|330255777|gb|AEC10871.1|
           UDP-xylose synthase 4 [Arabidopsis thaliana]
          Length = 443

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 280 VEG*MRLMEGDHVGPFNLGNPGEFTMLELARV 375
           VEG MRLMEG+HVGPFNLGNPGEFTMLELA+V
Sbjct: 338 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 369


>ref|NP_001055318.1| Os05g0363200 [Oryza sativa Japonica Group]
           gi|49387469|dbj|BAD24936.1| UDP-glucuronic acid
           decarboxylase [Oryza sativa Japonica Group]
           gi|113578869|dbj|BAF17232.1| Os05g0363200 [Oryza sativa
           Japonica Group] gi|215768595|dbj|BAH00824.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 447

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 280 VEG*MRLMEGDHVGPFNLGNPGEFTMLELARV 375
           VEG MRLMEG+HVGPFNLGNPGEFTMLELA+V
Sbjct: 342 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAKV 373


Top