BLASTX nr result

ID: Bupleurum21_contig00034873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034873
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525015.1| conserved hypothetical protein [Ricinus comm...   137   9e-31
ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243...   137   9e-31
ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816...   130   1e-28
ref|XP_003536971.1| PREDICTED: uncharacterized protein LOC100802...   130   1e-28

>ref|XP_002525015.1| conserved hypothetical protein [Ricinus communis]
           gi|223535677|gb|EEF37342.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  137 bits (345), Expect = 9e-31
 Identities = 77/132 (58%), Positives = 87/132 (65%), Gaps = 6/132 (4%)
 Frame = +2

Query: 56  MTSICTSNCVKDANITARVPVIRATYVNLYKWPESDAEFVKSVGSAS-GSERQRQHPRVV 232
           MTS+C SNCV DA    RVPV RATYVNLYKWPESDAEF+KSV     G       PRVV
Sbjct: 1   MTSVCISNCVNDAR-DPRVPV-RATYVNLYKWPESDAEFIKSVRRVGQGLHGHYGQPRVV 58

Query: 233 DSVSCRQLYLRSYTFSRKETLPEKTKKCLGRVKQKVSN-----XXXXXXXXXXXXXXXXV 397
           DS+SCRQ+YLRSYTFSRKE++PE+TKKC+GRVK+KV+N                     V
Sbjct: 59  DSISCRQMYLRSYTFSRKESVPERTKKCIGRVKEKVANHGKKIKEKGGRRRNKCLVFRKV 118

Query: 398 KELSCATLCAIF 433
           KE SC  L  IF
Sbjct: 119 KEFSCNALFRIF 130


>ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243200 [Vitis vinifera]
           gi|147771778|emb|CAN66779.1| hypothetical protein
           VITISV_039550 [Vitis vinifera]
          Length = 141

 Score =  137 bits (345), Expect = 9e-31
 Identities = 75/131 (57%), Positives = 91/131 (69%), Gaps = 4/131 (3%)
 Frame = +2

Query: 56  MTSICTSNCVKDANITARVPVIRATYVNLYKWPESDAEFVKSVGSASGSERQRQHPRVVD 235
           M+S+C S+CV DA    RVPV RATYVNLYKWPESDAEF+KSV S        +HPRVVD
Sbjct: 1   MSSVCISSCVNDA----RVPV-RATYVNLYKWPESDAEFIKSVSS-------NRHPRVVD 48

Query: 236 SVSCRQLYLRSYTFSRKETLPEKTKKCLGRVKQKVSN----XXXXXXXXXXXXXXXXVKE 403
           S+SCRQ+YLRSYTFS+KET+PEKT KC GRVK++V++                    VKE
Sbjct: 49  SISCRQMYLRSYTFSKKETVPEKTIKCFGRVKERVAHGRRRNKGEELHGKRFVVVRKVKE 108

Query: 404 LSCATLCAIFQ 436
           +SC+ L AIF+
Sbjct: 109 ISCSALYAIFR 119


>ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|222868068|gb|EEF05199.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  132 bits (332), Expect = 3e-29
 Identities = 74/132 (56%), Positives = 85/132 (64%), Gaps = 6/132 (4%)
 Frame = +2

Query: 56  MTSICTSNCVKDANITARVPVIRATYVNLYKWPESDAEFVKSVGSASGSERQRQHPRVVD 235
           M+S+C SNCV D     RVPV RA YVNLYKW ESDAE +KSV   +G      HPRVVD
Sbjct: 1   MSSVCISNCVNDTR-DPRVPV-RANYVNLYKWSESDAELIKSVRRVAG-HGLHGHPRVVD 57

Query: 236 SVSCRQLYLRSYTFSRKETLPEKTKKCLGRVKQKVSN------XXXXXXXXXXXXXXXXV 397
           S+SCRQLYLRSYTFSRKE++PEKTKKC GRVK+KV+N                       
Sbjct: 58  SISCRQLYLRSYTFSRKESMPEKTKKCFGRVKEKVANHGKKRKDQIKGGRKRKCLVFRKA 117

Query: 398 KELSCATLCAIF 433
           KE+SC+ L  IF
Sbjct: 118 KEVSCSALFRIF 129


>ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816302 [Glycine max]
          Length = 140

 Score =  130 bits (327), Expect = 1e-28
 Identities = 73/130 (56%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
 Frame = +2

Query: 56  MTSICTSNCVKDANITARVPVIRATYVNLYKWPESDAEFVKSVGSASGSERQRQHPRVVD 235
           M+S+C S CV DA    RVPV RATYVNLYKWPESDAEFV+  G   GS     HPRVVD
Sbjct: 1   MSSVCISKCVNDA----RVPV-RATYVNLYKWPESDAEFVRRRGG--GSHVCGGHPRVVD 53

Query: 236 SVSCRQLYLRSYTFSRKETLPEKTKKCLGRVKQKV----SNXXXXXXXXXXXXXXXXVKE 403
           S+SCRQ+YLRSY FSRKE++PEKT+KC GRVK++V    S+                ++E
Sbjct: 54  SISCRQMYLRSYKFSRKESVPEKTQKCFGRVKERVKKQGSSQHNHGVGRRKCLVWRKMRE 113

Query: 404 LSCATLCAIF 433
           +SCA L  IF
Sbjct: 114 ISCAALFRIF 123


>ref|XP_003536971.1| PREDICTED: uncharacterized protein LOC100802203 [Glycine max]
          Length = 141

 Score =  130 bits (327), Expect = 1e-28
 Identities = 72/128 (56%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
 Frame = +2

Query: 56  MTSICTSNCVKDANITARVPVIRATYVNLYKWPESDAEFVKSVGSASGSERQRQHPRVVD 235
           M+S+C S CV DA    RVPV RATYVNLYKWPESDAEFV+  G   GS     HPRVVD
Sbjct: 1   MSSVCLSKCVNDAR-DPRVPV-RATYVNLYKWPESDAEFVRRRGG--GSHMCGGHPRVVD 56

Query: 236 SVSCRQLYLRSYTFSRKETLPEKTKKCLGRVKQKV--SNXXXXXXXXXXXXXXXXVKELS 409
           S+SCRQ+YLRSY FSRKE++PEKT+KC GRVK++V                    ++E+S
Sbjct: 57  SISCRQMYLRSYKFSRKESVPEKTQKCFGRVKERVKKQGRSHHGIRRRKCLVWRKMREIS 116

Query: 410 CATLCAIF 433
           CA L  IF
Sbjct: 117 CAALFRIF 124


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