BLASTX nr result

ID: Bupleurum21_contig00034862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034862
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527217.1| ATP-binding cassette transporter, putative [...   252   3e-65
emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]   246   2e-63
ref|XP_002310338.1| white-brown-complex ABC transporter family [...   241   6e-62
ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6...   236   3e-60
ref|XP_003612949.1| ABC transporter G family member [Medicago tr...   227   1e-57

>ref|XP_002527217.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533393|gb|EEF35143.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 724

 Score =  252 bits (644), Expect = 3e-65
 Identities = 124/150 (82%), Positives = 137/150 (91%)
 Frame = +1

Query: 124 SSSPSYYTHSGDILAAGNLTPHSSDYTLNENDYLTPNVAPANMKYQHLGPKFANSFLSEI 303
           SSSP YYT+S +IL +   TPHSSDYT+NENDYLTPN+AP +M Y HLGPKF+NSF SE 
Sbjct: 398 SSSPGYYTYSSEILPS-TPTPHSSDYTVNENDYLTPNIAPNHMAY-HLGPKFSNSFFSET 455

Query: 304 WVLMRRNFINIRRTPELFLSRLMVLTVMGILMATLFLHPKSDLQGITNRLSFFIFTVCLF 483
           WVLMRRNFINIRRTPELFLSRLMVLT+MG++MAT+F++PK D QGITNRLSFFIFTVCLF
Sbjct: 456 WVLMRRNFINIRRTPELFLSRLMVLTIMGLMMATMFMNPKEDSQGITNRLSFFIFTVCLF 515

Query: 484 FFSSNDAVPAFIQERFIFVRETSHNAYRAS 573
           FFSSNDAVPAFIQERFIFVRETSHNAYRAS
Sbjct: 516 FFSSNDAVPAFIQERFIFVRETSHNAYRAS 545


>emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]
          Length = 725

 Score =  246 bits (628), Expect = 2e-63
 Identities = 122/150 (81%), Positives = 133/150 (88%)
 Frame = +1

Query: 124 SSSPSYYTHSGDILAAGNLTPHSSDYTLNENDYLTPNVAPANMKYQHLGPKFANSFLSEI 303
           S+SP Y T S DIL  G  TPHSSDYT+NE+DYLTPN+AP    YQHLGPKFANSFL EI
Sbjct: 399 SASPGY-TRSNDILE-GTPTPHSSDYTVNESDYLTPNIAPKAAAYQHLGPKFANSFLDEI 456

Query: 304 WVLMRRNFINIRRTPELFLSRLMVLTVMGILMATLFLHPKSDLQGITNRLSFFIFTVCLF 483
           W+LMRRNFINIRRTPELFLSRL+VLTVMG +MAT+F  PK+D+QGIT+RLSFFIFTVCLF
Sbjct: 457 WILMRRNFINIRRTPELFLSRLLVLTVMGFMMATMFTRPKADIQGITSRLSFFIFTVCLF 516

Query: 484 FFSSNDAVPAFIQERFIFVRETSHNAYRAS 573
           FFSSNDAVPAFIQERFIFVRET HNAYRAS
Sbjct: 517 FFSSNDAVPAFIQERFIFVRETGHNAYRAS 546


>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score =  241 bits (615), Expect = 6e-62
 Identities = 122/150 (81%), Positives = 129/150 (86%)
 Frame = +1

Query: 124 SSSPSYYTHSGDILAAGNLTPHSSDYTLNENDYLTPNVAPANMKYQHLGPKFANSFLSEI 303
           SSSP YYT S +IL  G  TPHSSDYT+NENDYLTPNV     K   LGPKF NSF SE 
Sbjct: 408 SSSPGYYTFSSEILP-GTPTPHSSDYTVNENDYLTPNVP---QKTHLLGPKFTNSFFSET 463

Query: 304 WVLMRRNFINIRRTPELFLSRLMVLTVMGILMATLFLHPKSDLQGITNRLSFFIFTVCLF 483
           W+LMRRNF NIRRTPELFLSRLMVLTVMG +MAT+F+HPK DLQGITNRLSFFIFTVCLF
Sbjct: 464 WILMRRNFKNIRRTPELFLSRLMVLTVMGFMMATMFMHPKQDLQGITNRLSFFIFTVCLF 523

Query: 484 FFSSNDAVPAFIQERFIFVRETSHNAYRAS 573
           FFSSNDAVPAFIQERFIFVRETSHN+YRAS
Sbjct: 524 FFSSNDAVPAFIQERFIFVRETSHNSYRAS 553


>ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6-like [Glycine max]
          Length = 729

 Score =  236 bits (601), Expect = 3e-60
 Identities = 116/150 (77%), Positives = 131/150 (87%)
 Frame = +1

Query: 124 SSSPSYYTHSGDILAAGNLTPHSSDYTLNENDYLTPNVAPANMKYQHLGPKFANSFLSEI 303
           ++SP YYT+S +IL A   TPHSSDYT+NENDY+T +    N  ++HLGPKFANS++ EI
Sbjct: 405 NASPGYYTYSSEILQA-TPTPHSSDYTVNENDYITAS----NATHEHLGPKFANSYIGEI 459

Query: 304 WVLMRRNFINIRRTPELFLSRLMVLTVMGILMATLFLHPKSDLQGITNRLSFFIFTVCLF 483
           W+LMRRNFINIRRTPELFLSRLMVLT MGI+MAT+F  PK  LQGITNRLSFFIFTVCLF
Sbjct: 460 WILMRRNFINIRRTPELFLSRLMVLTFMGIMMATMFFKPKETLQGITNRLSFFIFTVCLF 519

Query: 484 FFSSNDAVPAFIQERFIFVRETSHNAYRAS 573
           FFSSNDAVPAFIQERFIF+RETSHNAYRAS
Sbjct: 520 FFSSNDAVPAFIQERFIFIRETSHNAYRAS 549


>ref|XP_003612949.1| ABC transporter G family member [Medicago truncatula]
           gi|163889368|gb|ABY48138.1| ABC transporter [Medicago
           truncatula] gi|258518205|gb|ACV73543.1| STR2 [Medicago
           truncatula] gi|258518207|gb|ACV73544.1| STR2 [Medicago
           truncatula] gi|355514284|gb|AES95907.1| ABC transporter
           G family member [Medicago truncatula]
          Length = 727

 Score =  227 bits (578), Expect = 1e-57
 Identities = 112/149 (75%), Positives = 127/149 (85%)
 Frame = +1

Query: 127 SSPSYYTHSGDILAAGNLTPHSSDYTLNENDYLTPNVAPANMKYQHLGPKFANSFLSEIW 306
           +SP  YT+S +IL A   TPHSSDY ++ENDYLTP     N   +HLGPKFANS++ E W
Sbjct: 406 ASPGIYTYSSEILPA-TPTPHSSDYVVDENDYLTPT----NSSQEHLGPKFANSYIGETW 460

Query: 307 VLMRRNFINIRRTPELFLSRLMVLTVMGILMATLFLHPKSDLQGITNRLSFFIFTVCLFF 486
           +LMRRNF NIRRTPELFLSRLMVLT MG++MAT+F +PK+ LQGITNRLSFFIFTVCLFF
Sbjct: 461 ILMRRNFTNIRRTPELFLSRLMVLTFMGVMMATMFHNPKNTLQGITNRLSFFIFTVCLFF 520

Query: 487 FSSNDAVPAFIQERFIFVRETSHNAYRAS 573
           FSSNDAVPAFIQERFIF+RETSHNAYRAS
Sbjct: 521 FSSNDAVPAFIQERFIFIRETSHNAYRAS 549


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