BLASTX nr result

ID: Bupleurum21_contig00034852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034852
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263867.1| PREDICTED: nephrocystin-3 [Vitis vinifera]        142   4e-32
ref|XP_002532368.1| kinesin light chain, putative [Ricinus commu...   141   6e-32
ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin...   139   3e-31
ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sati...   139   3e-31
ref|XP_003536936.1| PREDICTED: nephrocystin-3-like [Glycine max]      130   8e-29

>ref|XP_002263867.1| PREDICTED: nephrocystin-3 [Vitis vinifera]
          Length = 647

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/99 (71%), Positives = 84/99 (84%)
 Frame = -3

Query: 299 FESAETIDEMVKAFKEMEATFDEKELGLACLKLGLKYDQEGEDPEKILSYGVRALKILDS 120
           FESA + + M+KAF+EME++FDEKELGLA LKLGLK DQEGEDPEK L++  RALK LD 
Sbjct: 105 FESATSTESMLKAFQEMESSFDEKELGLASLKLGLKMDQEGEDPEKTLAFANRALKALDK 164

Query: 119 NDKLSFPLAMTLQLLGAACYNLKRFNDSLGYLNRANRIL 3
           NDK S  +AM LQL+G+A Y+LKRFNDSLGYLNRANR+L
Sbjct: 165 NDKPSLLVAMALQLMGSANYSLKRFNDSLGYLNRANRVL 203


>ref|XP_002532368.1| kinesin light chain, putative [Ricinus communis]
           gi|223527924|gb|EEF30011.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 618

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/102 (70%), Positives = 86/102 (84%), Gaps = 2/102 (1%)
 Frame = -3

Query: 302 AFESAETIDEMVKAFKEMEATFDEKELGLACLKLGLKYDQEGEDPEKILSYGVRALKILD 123
           AFESA+T DEM++AFKEME +F+EKELGLA LKLGLK DQEGEDPEK LS+  RAL +LD
Sbjct: 88  AFESADTADEMLQAFKEMETSFNEKELGLASLKLGLKLDQEGEDPEKALSFATRALNVLD 147

Query: 122 SND--KLSFPLAMTLQLLGAACYNLKRFNDSLGYLNRANRIL 3
           +ND  K S  +AM LQL+G+  Y+LKRFNDSLGYL+RANR+L
Sbjct: 148 NNDNSKPSLLVAMALQLMGSVNYSLKRFNDSLGYLSRANRVL 189


>ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Cucumis
           sativus]
          Length = 634

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/102 (68%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
 Frame = -3

Query: 302 AFESAETIDEMVKAFKEMEATFDEKELGLACLKLGLKYDQEGEDPEKILSYGVRALKILD 123
           +FESAET+DEM KAFKEME+ F+EK+LGLA LK+ LK D+EGEDPE++L Y  RALK LD
Sbjct: 95  SFESAETVDEMFKAFKEMESAFEEKDLGLASLKIALKLDREGEDPEQVLLYADRALKALD 154

Query: 122 SNDKL--SFPLAMTLQLLGAACYNLKRFNDSLGYLNRANRIL 3
            +D    S P+AMTLQL+G+  Y+LKRF+DSLGYLNRANRIL
Sbjct: 155 KDDNRNPSLPVAMTLQLIGSVNYSLKRFSDSLGYLNRANRIL 196


>ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sativus]
          Length = 634

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/102 (68%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
 Frame = -3

Query: 302 AFESAETIDEMVKAFKEMEATFDEKELGLACLKLGLKYDQEGEDPEKILSYGVRALKILD 123
           +FESAET+DEM KAFKEME+ F+EK+LGLA LK+ LK D+EGEDPE++L Y  RALK LD
Sbjct: 95  SFESAETVDEMFKAFKEMESAFEEKDLGLASLKIALKLDREGEDPEQVLLYADRALKALD 154

Query: 122 SNDKL--SFPLAMTLQLLGAACYNLKRFNDSLGYLNRANRIL 3
            +D    S P+AMTLQL+G+  Y+LKRF+DSLGYLNRANRIL
Sbjct: 155 KDDNRNPSLPVAMTLQLIGSVNYSLKRFSDSLGYLNRANRIL 196


>ref|XP_003536936.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 615

 Score =  130 bits (328), Expect = 8e-29
 Identities = 67/104 (64%), Positives = 81/104 (77%), Gaps = 4/104 (3%)
 Frame = -3

Query: 302 AFESAETIDEMVKAFKEMEATFDEKELGLACLKLGLKYDQEGEDPEKILSYGVRALKILD 123
           AFESAET +EM+KAF  ME  F+E+ELGLA LK+GLK D EGEDPEK LS+  RALK L+
Sbjct: 81  AFESAETTEEMLKAFSNMEGVFEERELGLASLKIGLKLDHEGEDPEKALSFAKRALKALE 140

Query: 122 ----SNDKLSFPLAMTLQLLGAACYNLKRFNDSLGYLNRANRIL 3
               +N   S P+AM LQLLG+  ++LKRF+DSLGYLNRANR+L
Sbjct: 141 KDNNNNTPSSLPVAMCLQLLGSVSFSLKRFSDSLGYLNRANRVL 184


Top