BLASTX nr result

ID: Bupleurum21_contig00034839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034839
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   252   2e-65
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              252   2e-65
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]   252   2e-65
ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-61
ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   237   6e-61

>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Vitis vinifera]
          Length = 786

 Score =  252 bits (644), Expect = 2e-65
 Identities = 123/160 (76%), Positives = 140/160 (87%)
 Frame = +1

Query: 1    YACMIDLLGRSGKIFEAEELLNEMDVEPDATVWKALLAACRVHGAVELAERAAKALFKLE 180
            YACMIDLLGRSGK+ EA+ELLN+M V+PDATVWKALLAACRVHG VEL ERAA  LF+LE
Sbjct: 554  YACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELE 613

Query: 181  PGSAVPYVLLSNIYSTAGKWEEASKIRLLMKNNGITKEPGRSWIEMNSKVHTFMSEDRSH 360
            P +AVPYVLLSN+YS AGKWEEA+K R LMK  G++KEPG SWIEM+SKVH FMSEDRSH
Sbjct: 614  PKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSH 673

Query: 361  PYIVDIYSKIDEVMKLIKEAGYVPDVNFALQDVNEEVKEL 480
            P   +IYSK+DE+M LIKEAGYVPD+NFAL D++EE KEL
Sbjct: 674  PRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKEL 713


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  252 bits (644), Expect = 2e-65
 Identities = 123/160 (76%), Positives = 140/160 (87%)
 Frame = +1

Query: 1   YACMIDLLGRSGKIFEAEELLNEMDVEPDATVWKALLAACRVHGAVELAERAAKALFKLE 180
           YACMIDLLGRSGK+ EA+ELLN+M V+PDATVWKALLAACRVHG VEL ERAA  LF+LE
Sbjct: 487 YACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELE 546

Query: 181 PGSAVPYVLLSNIYSTAGKWEEASKIRLLMKNNGITKEPGRSWIEMNSKVHTFMSEDRSH 360
           P +AVPYVLLSN+YS AGKWEEA+K R LMK  G++KEPG SWIEM+SKVH FMSEDRSH
Sbjct: 547 PKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSH 606

Query: 361 PYIVDIYSKIDEVMKLIKEAGYVPDVNFALQDVNEEVKEL 480
           P   +IYSK+DE+M LIKEAGYVPD+NFAL D++EE KEL
Sbjct: 607 PRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKEL 646


>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  252 bits (644), Expect = 2e-65
 Identities = 123/160 (76%), Positives = 140/160 (87%)
 Frame = +1

Query: 1   YACMIDLLGRSGKIFEAEELLNEMDVEPDATVWKALLAACRVHGAVELAERAAKALFKLE 180
           YACMIDLLGRSGK+ EA+ELLN+M V+PDATVWKALLAACRVHG VEL ERAA  LF+LE
Sbjct: 208 YACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELE 267

Query: 181 PGSAVPYVLLSNIYSTAGKWEEASKIRLLMKNNGITKEPGRSWIEMNSKVHTFMSEDRSH 360
           P +AVPYVLLSN+YS AGKWEEA+K R LMK  G++KEPG SWIEM+SKVH FMSEDRSH
Sbjct: 268 PKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSH 327

Query: 361 PYIVDIYSKIDEVMKLIKEAGYVPDVNFALQDVNEEVKEL 480
           P   +IYSK+DE+M LIKEAGYVPD+NFAL D++EE KEL
Sbjct: 328 PRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKEL 367


>ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 840

 Score =  239 bits (610), Expect = 2e-61
 Identities = 114/159 (71%), Positives = 136/159 (85%)
 Frame = +1

Query: 1    YACMIDLLGRSGKIFEAEELLNEMDVEPDATVWKALLAACRVHGAVELAERAAKALFKLE 180
            YACMIDLLGR+GKI EAE LLN MDVEPDAT+WK+LL+ACRVHG +EL ERA K L KLE
Sbjct: 543  YACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLE 602

Query: 181  PGSAVPYVLLSNIYSTAGKWEEASKIRLLMKNNGITKEPGRSWIEMNSKVHTFMSEDRSH 360
            P +++PYVLLSN++S AG+WE+A+ IR  MK  GI KEPG SWIEM S+VHTF+SEDRSH
Sbjct: 603  PSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSH 662

Query: 361  PYIVDIYSKIDEVMKLIKEAGYVPDVNFALQDVNEEVKE 477
            P   +IYSKIDE+M LIKEAG+VPD+NFAL+D++EE KE
Sbjct: 663  PLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKE 701


>ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  237 bits (605), Expect = 6e-61
 Identities = 113/159 (71%), Positives = 136/159 (85%)
 Frame = +1

Query: 1    YACMIDLLGRSGKIFEAEELLNEMDVEPDATVWKALLAACRVHGAVELAERAAKALFKLE 180
            YACMIDLLGR+GKI EAE LLN MDVEPDAT+WK+LL+ACRVHG +EL ERA K L KLE
Sbjct: 543  YACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLE 602

Query: 181  PGSAVPYVLLSNIYSTAGKWEEASKIRLLMKNNGITKEPGRSWIEMNSKVHTFMSEDRSH 360
            P +++PYVLLSN++S AG+WE+A+ IR  MK  GI +EPG SWIEM S+VHTF+SEDRSH
Sbjct: 603  PSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSH 662

Query: 361  PYIVDIYSKIDEVMKLIKEAGYVPDVNFALQDVNEEVKE 477
            P   +IYSKIDE+M LIKEAG+VPD+NFAL+D++EE KE
Sbjct: 663  PLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKE 701


Top