BLASTX nr result

ID: Bupleurum21_contig00034830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034830
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Viti...   229   2e-58
ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Viti...   229   2e-58
ref|XP_003538313.1| PREDICTED: histone deacetylase 19-like [Glyc...   228   3e-58
ref|XP_003517607.1| PREDICTED: histone deacetylase 19-like [Glyc...   228   5e-58
gb|AAF82385.1| histone deacetylase [Mesembryanthemum crystallinum]    227   9e-58

>ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
           gi|296087188|emb|CBI33562.3| unnamed protein product
           [Vitis vinifera]
          Length = 502

 Score =  229 bits (584), Expect = 2e-58
 Identities = 107/113 (94%), Positives = 110/113 (97%)
 Frame = +3

Query: 3   RFHADDYVSFLKGITPDSQQDYLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 182
           RFHADDYVSFL+GITP++QQD LRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN
Sbjct: 74  RFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 133

Query: 183 HGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIH 341
           HG CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLK HERVLYVDIDIH
Sbjct: 134 HGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIH 186


>ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
          Length = 502

 Score =  229 bits (583), Expect = 2e-58
 Identities = 106/113 (93%), Positives = 110/113 (97%)
 Frame = +3

Query: 3   RFHADDYVSFLKGITPDSQQDYLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 182
           RFHADDYVSFL+GITP++QQD LRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN
Sbjct: 74  RFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 133

Query: 183 HGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIH 341
           HG CDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLK HERVLYVDIDIH
Sbjct: 134 HGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIH 186


>ref|XP_003538313.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  228 bits (582), Expect = 3e-58
 Identities = 103/113 (91%), Positives = 112/113 (99%)
 Frame = +3

Query: 3   RFHADDYVSFLKGITPDSQQDYLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 182
           +FHADDYV+FL+GITP++QQD LRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGA+KLN
Sbjct: 74  KFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLN 133

Query: 183 HGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIH 341
           HG+CD+AINWAGGLHHAKKCEASGFCYVNDIVLAILELLK+HERVLYVDIDIH
Sbjct: 134 HGACDVAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIH 186


>ref|XP_003517607.1| PREDICTED: histone deacetylase 19-like [Glycine max]
          Length = 497

 Score =  228 bits (580), Expect = 5e-58
 Identities = 104/113 (92%), Positives = 111/113 (98%)
 Frame = +3

Query: 3   RFHADDYVSFLKGITPDSQQDYLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 182
           +FHADDYV+FL+GITP++QQD LRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGA+KLN
Sbjct: 74  KFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGALKLN 133

Query: 183 HGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIH 341
           HG CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLK+HERVLYVDIDIH
Sbjct: 134 HGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIH 186


>gb|AAF82385.1| histone deacetylase [Mesembryanthemum crystallinum]
          Length = 500

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/113 (94%), Positives = 109/113 (96%)
 Frame = +3

Query: 3   RFHADDYVSFLKGITPDSQQDYLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 182
           RFHADDYVSFL+GITP+ QQD LRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN
Sbjct: 74  RFHADDYVSFLRGITPEMQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN 133

Query: 183 HGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIH 341
           HG CDIAINWAGGLHHAKK EASGFCYVNDIVLAILELLKVHERVLYVDIDIH
Sbjct: 134 HGLCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYVDIDIH 186


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