BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034829
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    97   1e-18
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    94   9e-18
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    91   1e-16
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    89   4e-16
gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...    88   6e-16

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/99 (44%), Positives = 68/99 (68%)
 Frame = +3

Query: 3    FLSNASTNVTDWLKDTFNVPHGKLPIKFLGVPLISSMLTINDCMPLIQKIRKRIGSWTSK 182
            +L+  S    + + D F    G+LP+++LG+PLI+  L+  DC+PL++++RKRIGSWTS+
Sbjct: 744  YLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSR 803

Query: 183  FLSYGCRLVLIKSTIFAIQSFWSSHFLLPNSVINTLEQI 299
            FLSY  RL LI S +++I +FW + F LP   I  LE++
Sbjct: 804  FLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKM 842


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/99 (41%), Positives = 70/99 (70%)
 Frame = +3

Query: 3   FLSNASTNVTDWLKDTFNVPHGKLPIKFLGVPLISSMLTINDCMPLIQKIRKRIGSWTSK 182
           +L+    +V   +   F+   GKLP+++LG+PL+S  LT +DC+PLI+++RK+I +WTS+
Sbjct: 632 YLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSR 691

Query: 183 FLSYGCRLVLIKSTIFAIQSFWSSHFLLPNSVINTLEQI 299
           FLS+  RL LI ST+++I +FW + F LP + I  ++++
Sbjct: 692 FLSFAGRLNLISSTLWSICNFWMAAFRLPRACIREIDKL 730


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/99 (41%), Positives = 64/99 (64%)
 Frame = +3

Query: 3    FLSNASTNVTDWLKDTFNVPHGKLPIKFLGVPLISSMLTINDCMPLIQKIRKRIGSWTSK 182
            F+++ S+     +   F    G LP+++LG+PL++  +T+ DC+PL++KIR RI SW ++
Sbjct: 999  FMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNR 1058

Query: 183  FLSYGCRLVLIKSTIFAIQSFWSSHFLLPNSVINTLEQI 299
            FLSY  RL L+ S I ++  FW S F LP + I  +EQI
Sbjct: 1059 FLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQI 1097


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/99 (40%), Positives = 65/99 (65%)
 Frame = +3

Query: 3   FLSNASTNVTDWLKDTFNVPHGKLPIKFLGVPLISSMLTINDCMPLIQKIRKRIGSWTSK 182
           +L+  S +    +   ++   GKLP+++LG+PL++  LT +D  PLI +IR+RIG WTS+
Sbjct: 465 YLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSR 524

Query: 183 FLSYGCRLVLIKSTIFAIQSFWSSHFLLPNSVINTLEQI 299
           +LS+  RL LI S +++I +FW + F LP   IN + +I
Sbjct: 525 YLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRI 563


>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/77 (50%), Positives = 59/77 (76%)
 Frame = +3

Query: 69  KLPIKFLGVPLISSMLTINDCMPLIQKIRKRIGSWTSKFLSYGCRLVLIKSTIFAIQSFW 248
           +LP+++LG+PL++  +T +D +PLI+KIRKRI SWT +FLSY  RL LIKS + +I +FW
Sbjct: 11  QLPVRYLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIKSVLMSITNFW 70

Query: 249 SSHFLLPNSVINTLEQI 299
           SS F LP + +  +E++
Sbjct: 71  SSAFRLPGNCMKEIERL 87