BLASTX nr result

ID: Bupleurum21_contig00034828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034828
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546996.1| PREDICTED: uncharacterized protein LOC100814...   112   4e-23
ref|XP_002513456.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
ref|XP_003542052.1| PREDICTED: uncharacterized protein LOC100803...   103   1e-20
ref|XP_002304759.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002297789.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20

>ref|XP_003546996.1| PREDICTED: uncharacterized protein LOC100814573 [Glycine max]
          Length = 454

 Score =  112 bits (279), Expect = 4e-23
 Identities = 71/159 (44%), Positives = 84/159 (52%), Gaps = 18/159 (11%)
 Frame = -2

Query: 424 VSCGCQSCVYHQLSSNDSM-----------------LPLMNVMTPEERRMSSLSDWAPSV 296
           V CGC  C  H    N+ M                 +P  N    EERRMS +SDWA SV
Sbjct: 173 VDCGCWHCEQHSAFLNELMVDSVARTSGANEVLQYKMPFSNE-DQEERRMSDMSDWASSV 231

Query: 295 NSSVDIQLQ-LDTEQDIYNLRKECDEKDTTIKXXXXXXXXXXXXXSKRIAELENVIRXXX 119
            SS DIQL  L  EQDIYNLR++C+EKDTTIK              KRIAELE++IR   
Sbjct: 232 TSSADIQLNNLAVEQDIYNLRRDCEEKDTTIKELTTLLNSNEVAKCKRIAELEDIIRRKN 291

Query: 118 XXXXXXXKEMATLEQKVSYLTRLRRPSSFSNSSARVKQP 2
                  K+M  LEQKV  LTRLRRPS  ++ S  ++ P
Sbjct: 292 TTISKLKKDMLVLEQKVVQLTRLRRPSFSTSGSNDIQLP 330


>ref|XP_002513456.1| conserved hypothetical protein [Ricinus communis]
           gi|223547364|gb|EEF48859.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 490

 Score =  106 bits (265), Expect = 2e-21
 Identities = 64/149 (42%), Positives = 83/149 (55%), Gaps = 19/149 (12%)
 Frame = -2

Query: 424 VSCGCQSCVYH--------------QLSSNDSML----PLMNVMTPEERRMSSLSDWAPS 299
           V CGC  C +H              + S  D +L    PL+N +  EERRMS LSDWA S
Sbjct: 174 VDCGCWHCDHHYNLFADPMHGNAVMKTSRGDEVLQYKTPLVNEVEQEERRMSDLSDWASS 233

Query: 298 VNSSVDIQLQLDT-EQDIYNLRKECDEKDTTIKXXXXXXXXXXXXXSKRIAELENVIRXX 122
           V+S+ DIQ+ +   + DIYNL+KEC+EKD TIK             SKR AELE++I   
Sbjct: 234 VSSTADIQMNMSAVDHDIYNLKKECEEKDATIKELTTVLQSKNMAGSKRTAELEDIIHRK 293

Query: 121 XXXXXXXXKEMATLEQKVSYLTRLRRPSS 35
                   +++  LEQK+ +LTRLRRPSS
Sbjct: 294 NSTIAKLKRDILVLEQKLVHLTRLRRPSS 322


>ref|XP_003542052.1| PREDICTED: uncharacterized protein LOC100803132 [Glycine max]
          Length = 493

 Score =  103 bits (257), Expect = 1e-20
 Identities = 71/160 (44%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
 Frame = -2

Query: 424 VSCGCQSCVYHQLSSNDSM------------------LPLMNVMTPEERRMSSLSDWAPS 299
           + CGC  C  H    N+ M                  +P  N    EERRMS +SDWA S
Sbjct: 175 IDCGCWHCEQHSGFFNELMEGASIARSSGANEVLQYKMPFSNE-DQEERRMSDMSDWASS 233

Query: 298 VNSSVDIQLQ-LDTEQDIYNLRKECDEKDTTIKXXXXXXXXXXXXXSKRIAELENVIRXX 122
           V SS DIQL  L  EQD+YNLR++ +EKDTTIK              KRIAELE+ IR  
Sbjct: 234 VTSSADIQLNNLAVEQDMYNLRRDSEEKDTTIKELTSLLNSNEVANCKRIAELEDFIRRK 293

Query: 121 XXXXXXXXKEMATLEQKVSYLTRLRRPSSFSNSSARVKQP 2
                   K+M  LEQKV  LTRLRRP SFS S     QP
Sbjct: 294 NATISKLKKDMLVLEQKVVQLTRLRRP-SFSASGTNDGQP 332


>ref|XP_002304759.1| predicted protein [Populus trichocarpa] gi|222842191|gb|EEE79738.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 18/148 (12%)
 Frame = -2

Query: 424 VSCGCQSCVYH-------------QLSSNDSML----PLMNVMTPEERRMSSLSDWAPSV 296
           V CGC  C  H             ++S  D +L    P +N +  EERRMS LSDWA SV
Sbjct: 204 VDCGCWHCDQHHDLLAGLMGNSVVKVSKGDEVLQYKMPFINEVEQEERRMSDLSDWASSV 263

Query: 295 NSSVDIQLQLDT-EQDIYNLRKECDEKDTTIKXXXXXXXXXXXXXSKRIAELENVIRXXX 119
            S+ ++Q+     +QD++NL++EC+EKD TIK             SKRIAELE++IR   
Sbjct: 264 TSAAEMQMNTYAIDQDMFNLKRECEEKDATIKELNSILQTNNMADSKRIAELEDIIRRKN 323

Query: 118 XXXXXXXKEMATLEQKVSYLTRLRRPSS 35
                  K++  LEQKV +LTRLRRPSS
Sbjct: 324 TMITRLRKDLMVLEQKVVHLTRLRRPSS 351


>ref|XP_002297789.1| predicted protein [Populus trichocarpa] gi|222845047|gb|EEE82594.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  102 bits (253), Expect = 4e-20
 Identities = 67/152 (44%), Positives = 82/152 (53%), Gaps = 18/152 (11%)
 Frame = -2

Query: 424 VSCGCQSCVYHQ-------------LSSNDSML----PLMNVMTPEERRMSSLSDWAPSV 296
           V CGC  C  HQ             +S  D +L    P +N +  EERRMS LSDWA SV
Sbjct: 184 VDCGCWHCDQHQDLLAGLMGNSVVKVSRGDEVLQYKMPFINEVEHEERRMSDLSDWASSV 243

Query: 295 NSSVDIQLQLDT-EQDIYNLRKECDEKDTTIKXXXXXXXXXXXXXSKRIAELENVIRXXX 119
            S+ D+Q+ +   +QDI NL++EC+EKD TIK             SKRI ELE++I    
Sbjct: 244 TSAADMQMNVFAIDQDICNLKRECEEKDATIKELAGILQSNNMAGSKRIGELEDIICRKN 303

Query: 118 XXXXXXXKEMATLEQKVSYLTRLRRPSSFSNS 23
                  K+M  LEQKV  LTRLRRPSS S S
Sbjct: 304 TTITRLRKDMMVLEQKVVNLTRLRRPSSSSFS 335


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