BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034812
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   388   e-106
ref|XP_003637737.1| Pentatricopeptide repeat-containing protein ...   374   e-101
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   361   1e-97
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   359   4e-97

>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  388 bits (997), Expect = e-106
 Identities = 178/277 (64%), Positives = 228/277 (82%)
 Frame = -3

Query: 848  GYSYKGHFEDAVKLLRRMKTEGIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKP 669
            GYS+KG FEDA++LL +M+ EGIKPD+VT+NG++SGY++WG   EAL ++ Q K  GL P
Sbjct: 445  GYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTP 504

Query: 668  DVVSWTALISGCSQNEKYKAALEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIH 489
            +VVSWTALISG SQ    + +L+FF +MQ+EG+ PNS +I CLL+ACA +SLL KGKEIH
Sbjct: 505  NVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIH 564

Query: 488  GMSIRNGFIEDIFVMTSLVDMYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGK 309
             +SIRNGFIED+FV T+L+DMYSKS SLK A+ +F RI+NK LA+WN MIMGFA++ LGK
Sbjct: 565  CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 624

Query: 308  QVIKLFNRMQEEGLQPDAVTFTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCM 129
            + I +FN MQ+ G+ PDA+TFTALLS+CK SGL+ EGW+YFDSM +DY IVP +EHY CM
Sbjct: 625  EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM 684

Query: 128  VDLLGKCGYPDEAWEFVKSMPLTPDSSVWGALLGSCR 18
            VDLLG+ GY DEAW+ + +MPL PD+++WGALLGSCR
Sbjct: 685  VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCR 721



 Score =  156 bits (394), Expect = 6e-36
 Identities = 84/278 (30%), Positives = 154/278 (55%), Gaps = 3/278 (1%)
 Frame = -3

Query: 845  YSYKGHFEDAVKLLRRMKTEGIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKPD 666
            YS  G  E A ++   M+         ++N ++S Y+  G +++A  +  +++ S +KPD
Sbjct: 279  YSKNGKLELARRVFDSMENRNTS----SWNSMISSYAALGFLNDAWSLFYELESSDMKPD 334

Query: 665  VVSWTALISGCSQNEKYKAALEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHG 486
            +V+W  L+SG   +   +  L     MQ EG KPNS+++  +L+A + +  L+ GKE HG
Sbjct: 335  IVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHG 394

Query: 485  MSIRNGFIEDIFVMTSLVDMYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQ 306
              +RNGF  D++V TSL+DMY K+ SL +A  +F  ++N+N+  WNS++ G++   + + 
Sbjct: 395  YVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 454

Query: 305  VIKLFNRMQEEGLQPDAVTFTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCMV 126
             ++L N+M++EG++PD VT+  ++S     G   E        KS  G+ P +  ++ ++
Sbjct: 455  ALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKS-LGLTPNVVSWTALI 513

Query: 125  DLLGKCGYPDEAWEFVKSMP---LTPDSSVWGALLGSC 21
                + G   ++ +F   M    + P+S+    LL +C
Sbjct: 514  SGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRAC 551



 Score =  104 bits (259), Expect = 3e-20
 Identities = 62/228 (27%), Positives = 108/228 (47%)
 Frame = -3

Query: 785 GIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISGCSQNEKYKAA 606
           G   D+     L++ Y     +++A  +  ++      P+ + W   I    Q+EK +  
Sbjct: 163 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP----NPEALLWNEAIILNLQSEKLQKG 218

Query: 605 LEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDM 426
           +E F +MQ   +K  + TI+ +L+AC  M  L+  K+IHG   R G   D+ +   L+ M
Sbjct: 219 VELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISM 278

Query: 425 YSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTF 246
           YSK+G L+ A  +F  + N+N ++WNSMI  +A          LF  ++   ++PD VT+
Sbjct: 279 YSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTW 338

Query: 245 TALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCMVDLLGKCGY 102
             LLS     G   E       M+ + G  P     + ++  + + G+
Sbjct: 339 NCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGF 385



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 34/283 (12%)
 Frame = -3

Query: 776 PDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISGCSQNE-KYKAALE 600
           PD    N L+S Y  +G+   A  +       GL  + + W + +     +       LE
Sbjct: 65  PDAAAKN-LISSYLGFGDFWSAAMVF----YVGLPRNYLKWNSFVEEFKSSAGSLHIVLE 119

Query: 599 FFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDMYS 420
            F E+  +G+  +S      LK C  +  +  G EIHG  I+ GF  D+++  +L++ Y 
Sbjct: 120 VFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYG 179

Query: 419 KSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTFTA 240
           +   L+ A  +F  + N     WN  I+        ++ ++LF +MQ   L+ +  T   
Sbjct: 180 RCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVR 239

Query: 239 LLSSCKASGLLN-----EGWRYFDSMKSDYGIV-PTIEHYS------------------- 135
           +L +C   G LN      G+ +   + SD  +  P I  YS                   
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299

Query: 134 -----CMVDLLGKCGYPDEAWEF---VKSMPLTPDSSVWGALL 30
                 M+      G+ ++AW     ++S  + PD   W  LL
Sbjct: 300 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342


>ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503672|gb|AES84875.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  374 bits (960), Expect = e-101
 Identities = 174/277 (62%), Positives = 228/277 (82%)
 Frame = -3

Query: 848 GYSYKGHFEDAVKLLRRMKTEGIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKP 669
           GYS+KG F +AVKLL +M  EGI PD+VT+NGLVSGYS+ G IDEAL II +IK SG+ P
Sbjct: 93  GYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITP 152

Query: 668 DVVSWTALISGCSQNEKYKAALEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIH 489
           +VVSWTALISGCSQNEKY  AL+ F +MQ E +KPNSTTI  LL ACAG SLL KG+E+H
Sbjct: 153 NVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELH 212

Query: 488 GMSIRNGFIEDIFVMTSLVDMYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGK 309
             S++ GF++DI+V T+L+DMYS++G LK AYN+F +I+ K L  WN M+MG+A+++ G+
Sbjct: 213 CFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGE 272

Query: 308 QVIKLFNRMQEEGLQPDAVTFTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCM 129
           +V+ L+++M+E  ++PDA+TFTALLS+CK SGL++EGW+YFDSM+ DY IVPTIEHY CM
Sbjct: 273 EVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCM 332

Query: 128 VDLLGKCGYPDEAWEFVKSMPLTPDSSVWGALLGSCR 18
           VDLLGK G+ DEA  F+++MP+ PD+S+WGALL SC+
Sbjct: 333 VDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCK 369



 Score =  110 bits (276), Expect = 3e-22
 Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
 Frame = -3

Query: 605 LEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDM 426
           L  F  +   G KP+S ++   L+A   +     GKEIHG  +R+    D++V TSLVDM
Sbjct: 3   LTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDM 62

Query: 425 YSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTF 246
           Y K+  L+ A  +  R +NKN+  WNS+I G++      + +KL N+M EEG+ PD VT+
Sbjct: 63  YVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTW 122

Query: 245 TALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCMVDLLGKCGYPDEAWEFVK--- 75
             L+S     G ++E     + +KS  GI P +  ++    L+  C   ++  + +K   
Sbjct: 123 NGLVSGYSMQGRIDEALTIINRIKSS-GITPNVVSWTA---LISGCSQNEKYMDALKIFS 178

Query: 74  ---SMPLTPDSSVWGALLGSCRAP 12
              +  + P+S+   +LL +C  P
Sbjct: 179 QMQAENVKPNSTTICSLLCACAGP 202


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  374 bits (960), Expect = e-101
 Identities = 176/277 (63%), Positives = 220/277 (79%)
 Frame = -3

Query: 848 GYSYKGHFEDAVKLLRRMKTEGIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKP 669
           GYS+KGHF+ A +LL RMK EGIKPD++T+N LV+GYS+ G+  EAL +I  IKISGL P
Sbjct: 32  GYSFKGHFDHAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDIKISGLTP 91

Query: 668 DVVSWTALISGCSQNEKYKAALEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIH 489
           +VVSWTALISGCSQN  Y  ++E FV+MQ+EGIKPNS TI  LL+ C G+SLL KGKEIH
Sbjct: 92  NVVSWTALISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIH 151

Query: 488 GMSIRNGFIEDIFVMTSLVDMYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGK 309
            +SIR  FIED++V T+L+D YSKSG L++A+ +F     K LA+WN MIMGFA+   G+
Sbjct: 152 CLSIRKSFIEDLYVATALIDTYSKSGDLESAHKVFWS-AEKTLASWNCMIMGFAINGCGR 210

Query: 308 QVIKLFNRMQEEGLQPDAVTFTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCM 129
           +VI L + MQ  G+ PDA+TFTALLS CK SGL+ EGW+ FD M +DYGI PTIEHYSCM
Sbjct: 211 EVIALLDGMQRAGILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCM 270

Query: 128 VDLLGKCGYPDEAWEFVKSMPLTPDSSVWGALLGSCR 18
            DLLG+ GY DEAW+F+++MP+ PD+SVWGA+LGSCR
Sbjct: 271 ADLLGRAGYLDEAWDFIQTMPIKPDASVWGAMLGSCR 307



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
 Frame = -3

Query: 428 MYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVT 249
           MY K+  L ++  IF  ++NKN+  WNS+I G++         +L NRM+EEG++PD +T
Sbjct: 1   MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60

Query: 248 FTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCMVDLLGKCGYPDEAWEFVKSM 69
           + +L++     G   E       +K   G+ P +  ++ ++    + G   E+ E    M
Sbjct: 61  WNSLVAGYSMRGHTKEALALIHDIKIS-GLTPNVVSWTALISGCSQNGNYSESIEAFVQM 119

Query: 68  P---LTPDSSVWGALLGSC 21
               + P+S+   +LL +C
Sbjct: 120 QEEGIKPNSATISSLLRTC 138


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Glycine max]
          Length = 911

 Score =  361 bits (927), Expect = 1e-97
 Identities = 168/282 (59%), Positives = 221/282 (78%)
 Frame = -3

Query: 848  GYSYKGHFEDAVKLLRRMKTEGIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKP 669
            GY+YKG F++A KLL +MK EGIKPD+VT+N LVSGYS+ G  +EAL +I +IK  GL P
Sbjct: 443  GYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTP 502

Query: 668  DVVSWTALISGCSQNEKYKAALEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIH 489
            +VVSWTA+ISGC QNE Y  AL+FF +MQ+E +KPNSTTI  LL+ACAG SLL  G+EIH
Sbjct: 503  NVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIH 562

Query: 488  GMSIRNGFIEDIFVMTSLVDMYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGK 309
              S+R+GF++DI++ T+L+DMY K G LK A+ +F  I+ K L  WN M+MG+A+Y  G+
Sbjct: 563  CFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGE 622

Query: 308  QVIKLFNRMQEEGLQPDAVTFTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCM 129
            +V  LF+ M++ G++PDA+TFTALLS CK SGL+ +GW+YFDSMK+DY I PTIEHYSCM
Sbjct: 623  EVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCM 682

Query: 128  VDLLGKCGYPDEAWEFVKSMPLTPDSSVWGALLGSCRAPYDI 3
            VDLLGK G+ DEA +F+ ++P   D+S+WGA+L +CR   DI
Sbjct: 683  VDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDI 724



 Score =  152 bits (383), Expect = 1e-34
 Identities = 85/253 (33%), Positives = 143/253 (56%), Gaps = 5/253 (1%)
 Frame = -3

Query: 764  TYNGLVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISGCSQNEKYKAALEFFVEM 585
            ++N ++S Y++   ++ A D++++++ SG+KPD+++W +L+SG      Y+  L  F  +
Sbjct: 300  SWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSL 359

Query: 584  QKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDMYSKSGSL 405
            Q  G KP+S +I   L+A  G+   + GKEIHG  +R+    D++V TSLVD Y K+  L
Sbjct: 360  QSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCL 419

Query: 404  KTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTFTALLSSC 225
              A  +F   +NKN+  WNS+I G+    L     KL N+M+EEG++PD VT+ +L+S  
Sbjct: 420  DKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGY 479

Query: 224  KASGLLNEGWRYFDSMKSDYGIVPTIEHYSCMVDLLGKCGYPD--EAWEFVKSMP---LT 60
              SG   E     + +KS  G+ P +  ++ M+   G C   +  +A +F   M    + 
Sbjct: 480  SMSGRSEEALAVINRIKS-LGLTPNVVSWTAMIS--GCCQNENYMDALQFFSQMQEENVK 536

Query: 59   PDSSVWGALLGSC 21
            P+S+    LL +C
Sbjct: 537  PNSTTICTLLRAC 549



 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 63/205 (30%), Positives = 104/205 (50%)
 Frame = -3

Query: 785 GIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISGCSQNEKYKAA 606
           G   D+     L++ Y  +  ID A  +  +   + L+ D + W  ++    ++EK++ A
Sbjct: 161 GFHVDVHLSCALINLYEKYLGIDGANQVFDE---TPLQEDFL-WNTIVMANLRSEKWEDA 216

Query: 605 LEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDM 426
           LE F  MQ    K    TI+ LL+AC  +  L++GK+IHG  IR G + +  +  S+V M
Sbjct: 217 LELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSM 276

Query: 425 YSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTF 246
           YS++  L+ A   F    + N A+WNS+I  +AV +       L   M+  G++PD +T+
Sbjct: 277 YSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITW 336

Query: 245 TALLSSCKASGLLNEGWRYFDSMKS 171
            +LLS     G        F S++S
Sbjct: 337 NSLLSGHLLQGSYENVLTNFRSLQS 361



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
 Frame = -3

Query: 779 KPDIVTYNG-LVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISG-CSQNEKYKAA 606
           K ++VT +G ++  Y  +G+ + A  +       G   + + W + I    S        
Sbjct: 60  KRNLVTMDGSMMRNYLQFGDFESATKVF----FVGFARNYLLWNSFIEEFASFGGDSHEI 115

Query: 605 LEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDM 426
           L  F E+  +G+K +S  +  +LK C  +  L  G E+H   ++ GF  D+ +  +L+++
Sbjct: 116 LAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINL 175

Query: 425 YSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTF 246
           Y K   +  A  +F     +    WN+++M        +  ++LF RMQ    +    T 
Sbjct: 176 YEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTI 235

Query: 245 TALLSSCKASGLLNEG 198
             LL +C     LNEG
Sbjct: 236 VKLLQACGKLRALNEG 251


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Glycine max]
          Length = 911

 Score =  359 bits (922), Expect = 4e-97
 Identities = 169/282 (59%), Positives = 221/282 (78%)
 Frame = -3

Query: 848  GYSYKGHFEDAVKLLRRMKTEGIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKP 669
            GY+YKG F++A KLL +MK EGIK D+VT+N LVSGYS+ G  +EAL +I +IK  GL P
Sbjct: 443  GYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTP 502

Query: 668  DVVSWTALISGCSQNEKYKAALEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIH 489
            +VVSWTA+ISGC QNE Y  AL+FF +MQ+E +KPNSTTI  LL+ACAG SLL KG+EIH
Sbjct: 503  NVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIH 562

Query: 488  GMSIRNGFIEDIFVMTSLVDMYSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGK 309
              S+++GF++DI++ T+L+DMYSK G LK A+ +F  I+ K L  WN M+MG+A+Y  G+
Sbjct: 563  CFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGE 622

Query: 308  QVIKLFNRMQEEGLQPDAVTFTALLSSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCM 129
            +V  LF+ M + G++PDA+TFTALLS CK SGL+ +GW+YFDSMK+DY I PTIEHYSCM
Sbjct: 623  EVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCM 682

Query: 128  VDLLGKCGYPDEAWEFVKSMPLTPDSSVWGALLGSCRAPYDI 3
            VDLLGK G+ DEA +F+ +MP   D+S+WGA+L +CR   DI
Sbjct: 683  VDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDI 724



 Score =  150 bits (378), Expect = 5e-34
 Identities = 86/260 (33%), Positives = 143/260 (55%), Gaps = 6/260 (2%)
 Frame = -3

Query: 773  DIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISGCSQNEKYKAALEFF 594
            ++ ++N ++S Y++ G ++ A D+ R+++ S +KPD+++W +L+SG      Y+  L   
Sbjct: 297  NLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNI 356

Query: 593  VEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDMYSKS 414
              +Q  G KP+S +I   L+A   +   + GKEIHG  +R+    D++V TSLVDMY K+
Sbjct: 357  RSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKN 416

Query: 413  GSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTFTALL 234
              L+ A  +F   +NKN+  WNS+I G+    L     KL  +M+EEG++ D VT+ +L+
Sbjct: 417  DCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLV 476

Query: 233  SSCKASGLLNEGWRYFDSMKSDYGIVPTIEHYSCMVDLLGKC---GYPDEAWEFVKSMP- 66
            S    SG   E     + +KS  G+ P +  ++ M+   G C    Y D A +F   M  
Sbjct: 477  SGYSMSGCSEEALAVINRIKS-LGLTPNVVSWTAMIS--GCCQNENYTD-ALQFFSQMQE 532

Query: 65   --LTPDSSVWGALLGSCRAP 12
              + P+S+    LL +C  P
Sbjct: 533  ENVKPNSTTISTLLRACAGP 552



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 58/185 (31%), Positives = 98/185 (52%)
 Frame = -3

Query: 785 GIKPDIVTYNGLVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISGCSQNEKYKAA 606
           G + D+     L++ Y     ID A  +  +   + L+ D + W  ++    ++E+++ A
Sbjct: 161 GFQVDVHLSCALINLYEKCLGIDRANQVFDE---TPLQEDFL-WNTIVMANLRSERWEDA 216

Query: 605 LEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDM 426
           LE    MQ    K    TI+ LL+AC  +  L++GK+IHG  IR G + +  +  S+V M
Sbjct: 217 LELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSM 276

Query: 425 YSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTF 246
           YS++  L+ A  +F    + NLA+WNS+I  +AV         LF  M+   ++PD +T+
Sbjct: 277 YSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITW 336

Query: 245 TALLS 231
            +LLS
Sbjct: 337 NSLLS 341



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
 Frame = -3

Query: 779 KPDIVTYNG-LVSGYSIWGNIDEALDIIRQIKISGLKPDVVSWTALISG-CSQNEKYKAA 606
           K ++VT +G ++  Y  +G+ + A  +       G   + + W + +    S        
Sbjct: 60  KGNLVTMDGSMMRNYLEFGDFESATKVF----FVGFARNYLLWNSFLEEFASFGGDSHEI 115

Query: 605 LEFFVEMQKEGIKPNSTTILCLLKACAGMSLLHKGKEIHGMSIRNGFIEDIFVMTSLVDM 426
           LE F E+  +G+K +S  +  +LK C  +  L  G E+H   ++ GF  D+ +  +L+++
Sbjct: 116 LEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINL 175

Query: 425 YSKSGSLKTAYNIFLRIRNKNLATWNSMIMGFAVYNLGKQVIKLFNRMQEEGLQPDAVTF 246
           Y K   +  A  +F     +    WN+++M        +  ++L  RMQ    +    T 
Sbjct: 176 YEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTI 235

Query: 245 TALLSSCKASGLLNEG 198
             LL +C     LNEG
Sbjct: 236 VKLLQACGKLRALNEG 251