BLASTX nr result

ID: Bupleurum21_contig00034795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034795
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26506.3| unnamed protein product [Vitis vinifera]               92   1e-19
ref|XP_002272599.1| PREDICTED: lysine-specific demethylase 5D-li...    92   1e-19
emb|CAN64784.1| hypothetical protein VITISV_005969 [Vitis vinifera]    91   5e-19
ref|XP_003534289.1| PREDICTED: lysine-specific demethylase 5C-li...    82   8e-17
ref|XP_002276932.1| PREDICTED: uncharacterized protein LOC100266...    82   1e-16

>emb|CBI26506.3| unnamed protein product [Vitis vinifera]
          Length = 1009

 Score = 92.4 bits (228), Expect(2) = 1e-19
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 12  KKGTVEYGINIDGTAFSNNSGDQLGRSKWNLKTLPHLAQSPLCFLKHEIPGVSEPMLYIG 191
           +KGTVEY INIDG+AFS  S DQLG+SKWNLKTLP L +SPL   +  IPGV++PMLYIG
Sbjct: 638 RKGTVEYAINIDGSAFSCASNDQLGKSKWNLKTLPQLPKSPLRLCETSIPGVTDPMLYIG 697

Query: 192 ML 197
           ML
Sbjct: 698 ML 699



 Score = 28.5 bits (62), Expect(2) = 1e-19
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 197 FSIFALRVEDHYLYRKN 247
           FS+FA  VEDHYLY  N
Sbjct: 700 FSMFAWHVEDHYLYSIN 716


>ref|XP_002272599.1| PREDICTED: lysine-specific demethylase 5D-like [Vitis vinifera]
          Length = 638

 Score = 92.4 bits (228), Expect(2) = 1e-19
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 12  KKGTVEYGINIDGTAFSNNSGDQLGRSKWNLKTLPHLAQSPLCFLKHEIPGVSEPMLYIG 191
           +KGTVEY INIDG+AFS  S DQLG+SKWNLKTLP L +SPL   +  IPGV++PMLYIG
Sbjct: 182 RKGTVEYAINIDGSAFSCASNDQLGKSKWNLKTLPQLPKSPLRLCETSIPGVTDPMLYIG 241

Query: 192 ML 197
           ML
Sbjct: 242 ML 243



 Score = 28.5 bits (62), Expect(2) = 1e-19
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 197 FSIFALRVEDHYLYRKN 247
           FS+FA  VEDHYLY  N
Sbjct: 244 FSMFAWHVEDHYLYSIN 260


>emb|CAN64784.1| hypothetical protein VITISV_005969 [Vitis vinifera]
          Length = 591

 Score = 90.5 bits (223), Expect(2) = 5e-19
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = +3

Query: 12  KKGTVEYGINIDGTAFSNNSGDQLGRSKWNLKTLPHLAQSPLCFLKHEIPGVSEPMLYIG 191
           +KGTVEY INIDG+AFS    DQLG+SKWNLKTLP L +SPL   +  IPGV++PMLYIG
Sbjct: 182 RKGTVEYAINIDGSAFSCAXNDQLGKSKWNLKTLPQLPKSPLRLCETSIPGVTDPMLYIG 241

Query: 192 ML 197
           ML
Sbjct: 242 ML 243



 Score = 28.5 bits (62), Expect(2) = 5e-19
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 197 FSIFALRVEDHYLYRKN 247
           FS+FA  VEDHYLY  N
Sbjct: 244 FSMFAWHVEDHYLYSIN 260


>ref|XP_003534289.1| PREDICTED: lysine-specific demethylase 5C-like [Glycine max]
          Length = 857

 Score = 82.0 bits (201), Expect(2) = 8e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +3

Query: 3   GCRKKGTVEYGINIDGTAFSNNSGDQLGRSKWNLKTLPHLAQSPLCFLKHEIPGVSEPML 182
           GC K  TVEY  ++DG+AFS++  DQLG SKWNLK L  L +S L  L+  IPGV+EPML
Sbjct: 207 GCGKMETVEYACDVDGSAFSSSPTDQLGNSKWNLKKLSRLPKSILRLLETSIPGVTEPML 266

Query: 183 YIGML 197
           YIGML
Sbjct: 267 YIGML 271



 Score = 29.6 bits (65), Expect(2) = 8e-17
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +2

Query: 197 FSIFALRVEDHYLYRKN 247
           FSIFA  VEDHYLY  N
Sbjct: 272 FSIFAWHVEDHYLYSIN 288


>ref|XP_002276932.1| PREDICTED: uncharacterized protein LOC100266131 [Vitis vinifera]
          Length = 884

 Score = 82.4 bits (202), Expect(2) = 1e-16
 Identities = 39/64 (60%), Positives = 49/64 (76%)
 Frame = +3

Query: 6   CRKKGTVEYGINIDGTAFSNNSGDQLGRSKWNLKTLPHLAQSPLCFLKHEIPGVSEPMLY 185
           C K  TVEY  ++DG+AFS++  DQLG+SKWNLK L  L +S L  L+ EIPGV++PMLY
Sbjct: 230 CGKTETVEYACDVDGSAFSSSPNDQLGKSKWNLKKLSRLPKSILRLLESEIPGVTDPMLY 289

Query: 186 IGML 197
           IGML
Sbjct: 290 IGML 293



 Score = 28.5 bits (62), Expect(2) = 1e-16
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 197 FSIFALRVEDHYLYRKN 247
           FS+FA  VEDHYLY  N
Sbjct: 294 FSMFAWHVEDHYLYSIN 310


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