BLASTX nr result

ID: Bupleurum21_contig00034781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034781
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   157   1e-36
gb|AFK42213.1| unknown [Lotus japonicus]                              154   1e-35
ref|NP_001237733.1| ribonucleotide reductase small subunit [Glyc...   153   1e-35
gb|AFF18835.1| ribonucleotide reductase small subunit, partial [...   152   3e-35
ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35

>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis] gi|223543878|gb|EEF45404.1|
           ribonucleoside-diphosphate reductase small chain,
           putative [Ricinus communis]
          Length = 342

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/82 (90%), Positives = 81/82 (98%)
 Frame = +3

Query: 3   LIGMNATLMSQYIKFVADRLLVSLGYERKYNVENPFDWMEFISLQGKANFFERRVGDYQK 182
           LIGMN+TLMSQYIKFVADRLLV+LGY+RKYNVENPFDWMEFISLQGKANFFERRVGDYQK
Sbjct: 261 LIGMNSTLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDYQK 320

Query: 183 ASIMSNLQDGTKSFVFKLDEDF 248
           AS+MS+LQDG K+FVFK+DEDF
Sbjct: 321 ASVMSSLQDGGKNFVFKMDEDF 342


>gb|AFK42213.1| unknown [Lotus japonicus]
          Length = 351

 Score =  154 bits (388), Expect = 1e-35
 Identities = 73/82 (89%), Positives = 80/82 (97%)
 Frame = +3

Query: 3   LIGMNATLMSQYIKFVADRLLVSLGYERKYNVENPFDWMEFISLQGKANFFERRVGDYQK 182
           LIGMN+TLMSQYIKFVADRLLVSLGY++KYNVENPFDWMEFISLQGKANFFERRVG+YQK
Sbjct: 270 LIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVENPFDWMEFISLQGKANFFERRVGEYQK 329

Query: 183 ASIMSNLQDGTKSFVFKLDEDF 248
           AS+MS+LQD  K+FVFKLDEDF
Sbjct: 330 ASVMSSLQDAGKNFVFKLDEDF 351


>ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
           gi|4894211|gb|AAD32302.1| ribonucleotide reductase small
           subunit [Glycine max]
          Length = 339

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/82 (89%), Positives = 79/82 (96%)
 Frame = +3

Query: 3   LIGMNATLMSQYIKFVADRLLVSLGYERKYNVENPFDWMEFISLQGKANFFERRVGDYQK 182
           LIGMN+ LMSQYIKFVADRLLV+LGY+RKYNVENPFDWMEFISLQGKANFFERRVGDYQK
Sbjct: 258 LIGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDYQK 317

Query: 183 ASIMSNLQDGTKSFVFKLDEDF 248
           AS+MS+LQD  K+FVFKLDEDF
Sbjct: 318 ASVMSSLQDAGKNFVFKLDEDF 339


>gb|AFF18835.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
          Length = 158

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/82 (90%), Positives = 80/82 (97%)
 Frame = +3

Query: 3   LIGMNATLMSQYIKFVADRLLVSLGYERKYNVENPFDWMEFISLQGKANFFERRVGDYQK 182
           LIGMN++LMSQYIKFVADRLLVSLG +RKYNVENPFDWMEFISLQGKANFFERRVGDYQK
Sbjct: 77  LIGMNSSLMSQYIKFVADRLLVSLGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQK 136

Query: 183 ASIMSNLQDGTKSFVFKLDEDF 248
           ASIMS+LQ+G K+FVFKLDEDF
Sbjct: 137 ASIMSSLQNGGKNFVFKLDEDF 158


>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/82 (86%), Positives = 79/82 (96%)
 Frame = +3

Query: 3   LIGMNATLMSQYIKFVADRLLVSLGYERKYNVENPFDWMEFISLQGKANFFERRVGDYQK 182
           LIGMNATLM  YIKFVADRLLV+LGY++KYNVENPFDWMEFISLQGKANFFERRVGDYQK
Sbjct: 261 LIGMNATLMGDYIKFVADRLLVALGYQKKYNVENPFDWMEFISLQGKANFFERRVGDYQK 320

Query: 183 ASIMSNLQDGTKSFVFKLDEDF 248
           AS+MS+LQDG K++VFK+DEDF
Sbjct: 321 ASVMSSLQDGGKNYVFKMDEDF 342


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