BLASTX nr result

ID: Bupleurum21_contig00034778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034778
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   154   5e-36
ref|XP_003598666.1| Integrator complex subunit [Medicago truncat...   151   6e-35
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   142   4e-32
ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arab...   139   2e-31
emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]   139   3e-31

>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score =  154 bits (390), Expect = 5e-36
 Identities = 72/111 (64%), Positives = 87/111 (78%)
 Frame = -2

Query: 334 FMDLECLDNKRQKVEKSLDAACLIHSEPYYKTVGNLHLWNASFIDIVVISSSMGLLGLPF 155
           F D      KRQK+E  LDA  L+ +EP+YKTV NLHLWNASFID+V+ISS MG++GLPF
Sbjct: 151 FFDSRFGSGKRQKIENLLDAKSLLFAEPWYKTVNNLHLWNASFIDVVLISSPMGIMGLPF 210

Query: 154 LTRKQGFSAKIYATEATIKLGKLMMEDLVVMHTEFRQLYGPEESGSPQWMK 2
           LTR +GFSAKIY TEA+ ++G+LMMEDLV MH EFRQ YGP ES  P W++
Sbjct: 211 LTRTKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPGESNFPSWLR 261


>ref|XP_003598666.1| Integrator complex subunit [Medicago truncatula]
           gi|355487714|gb|AES68917.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 268

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/112 (63%), Positives = 90/112 (80%), Gaps = 2/112 (1%)
 Frame = -2

Query: 331 MDLECLDN--KRQKVEKSLDAACLIHSEPYYKTVGNLHLWNASFIDIVVISSSMGLLGLP 158
           +DL  L N  KRQK+E  LDA  L+ +EP+YKTV  LHLWNAS ID+++ISS MG++GLP
Sbjct: 126 LDLSSLMNNEKRQKIEDLLDAKNLVFAEPWYKTVNKLHLWNASLIDVILISSPMGIMGLP 185

Query: 157 FLTRKQGFSAKIYATEATIKLGKLMMEDLVVMHTEFRQLYGPEESGSPQWMK 2
           +LTR++GFSAKIY TEA+ ++G+LMMEDLV MH EFRQ YGPEES  P W++
Sbjct: 186 YLTRQKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPEESNFPPWLR 237


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/106 (61%), Positives = 86/106 (81%)
 Frame = -2

Query: 322 ECLDNKRQKVEKSLDAACLIHSEPYYKTVGNLHLWNASFIDIVVISSSMGLLGLPFLTRK 143
           + +D KRQK E+ +D++ LI ++P++KTV +LHLWN  FID+V+ISS MG+LGLPFL+R 
Sbjct: 139 DSVDQKRQKHERPIDSSELIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRV 198

Query: 142 QGFSAKIYATEATIKLGKLMMEDLVVMHTEFRQLYGPEESGSPQWM 5
            GF AKIY TE T ++G+L+MEDLV+M+ EFRQ YG EESG PQWM
Sbjct: 199 NGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWM 244


>ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
           lyrata] gi|297328374|gb|EFH58793.1| hypothetical protein
           ARALYDRAFT_896920 [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/113 (61%), Positives = 85/113 (75%)
 Frame = -2

Query: 340 DEFMDLECLDNKRQKVEKSLDAACLIHSEPYYKTVGNLHLWNASFIDIVVISSSMGLLGL 161
           DE +D +    K+ K+E+ L  A L+  EP+YKTV  LHLW+ASFIDIV+IS+ MGLLGL
Sbjct: 58  DESLDAQNPIQKKHKLERQLTFADLVCEEPWYKTVKPLHLWDASFIDIVLISNPMGLLGL 117

Query: 160 PFLTRKQGFSAKIYATEATIKLGKLMMEDLVVMHTEFRQLYGPEESGSPQWMK 2
           PFLT+  GFSAKIY TEAT K+G+LMMEDLV MH EFR  +GP+ S  P W+K
Sbjct: 118 PFLTQNPGFSAKIYMTEATAKIGQLMMEDLVSMHAEFRCFHGPDNSSFPGWIK 170


>emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]
          Length = 665

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/101 (63%), Positives = 83/101 (82%)
 Frame = -2

Query: 307 KRQKVEKSLDAACLIHSEPYYKTVGNLHLWNASFIDIVVISSSMGLLGLPFLTRKQGFSA 128
           KRQK E+ +D++ LI ++P++KTV +LHLWN  FID+V+ISS MG+LGLPFL+R  GF A
Sbjct: 85  KRQKHERPIDSSELIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRVNGFRA 144

Query: 127 KIYATEATIKLGKLMMEDLVVMHTEFRQLYGPEESGSPQWM 5
           KIY TE T ++G+L+MEDLV+M+ EFRQ YG EESG PQWM
Sbjct: 145 KIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWM 185


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