BLASTX nr result

ID: Bupleurum21_contig00034774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034774
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]    70   2e-10
emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]    70   2e-10
emb|CAN83599.1| hypothetical protein VITISV_015691 [Vitis vinifera]    69   4e-10
emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]    65   6e-09
ref|NP_001054384.1| Os05g0102300 [Oryza sativa Japonica Group] g...    63   2e-08

>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 KAELDLYLDEDVVQKS---DVLTWWKVNEHKYPTLQLMARDFLXXXXXXXXXXXXXSTGG 48
           K+ELD YL+E V+ +    DVL+WWK N  KYPTLQ++ RD               STGG
Sbjct: 636 KSELDYYLEETVLPRISDFDVLSWWKTNGIKYPTLQMIVRDIYAIPVSTVASESAFSTGG 695

Query: 47  RLVSPHRNRLDPKTI 3
           R+VS HR+RL P T+
Sbjct: 696 RMVSKHRSRLHPNTL 710


>emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]
          Length = 1068

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 KAELDLYLDEDVVQKS---DVLTWWKVNEHKYPTLQLMARDFLXXXXXXXXXXXXXSTGG 48
           K+ELD YL+E V+ +    DVL+WWK N  KYPTLQ++ RD               STGG
Sbjct: 608 KSELDYYLEETVLPRISDFDVLSWWKTNGIKYPTLQMIVRDIYAIPVSTVASESAFSTGG 667

Query: 47  RLVSPHRNRLDPKTI 3
           R+VS HR+RL P T+
Sbjct: 668 RMVSKHRSRLHPNTL 682


>emb|CAN83599.1| hypothetical protein VITISV_015691 [Vitis vinifera]
          Length = 570

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 KAELDLYLDEDVVQKS---DVLTWWKVNEHKYPTLQLMARDFLXXXXXXXXXXXXXSTGG 48
           K+ELD YL+E ++ ++   DVL+WWK N  KYPTLQ++ RD               STGG
Sbjct: 431 KSELDYYLEESILPRTSNFDVLSWWKTNGIKYPTLQMIVRDIYAILVSTVASESAFSTGG 490

Query: 47  RLVSPHRNRLDPKTI 3
           ++VS HR+RL P T+
Sbjct: 491 KVVSKHRSRLHPDTL 505


>emb|CAN78233.1| hypothetical protein VITISV_027466 [Vitis vinifera]
          Length = 805

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 KAELDLYLDEDVVQKS---DVLTWWKVNEHKYPTLQLMARDFLXXXXXXXXXXXXXSTGG 48
           K+ELD YL+E ++ ++   DVL+WWK N  KYPTLQ+  RD               STGG
Sbjct: 460 KSELDYYLEESILPRNSNFDVLSWWKTNGIKYPTLQMTVRDIYAIPVSTVASESAFSTGG 519

Query: 47  RLVSPHRNRLDPKTI 3
           R+VS HR RL   T+
Sbjct: 520 RVVSKHRTRLHLDTL 534


>ref|NP_001054384.1| Os05g0102300 [Oryza sativa Japonica Group]
           gi|57863898|gb|AAW56929.1| unknown protein [Oryza sativa
           Japonica Group] gi|113577935|dbj|BAF16298.1|
           Os05g0102300 [Oryza sativa Japonica Group]
          Length = 542

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = -1

Query: 221 IKAELDLYLDEDVVQKS---DVLTWWKVNEHKYPTLQLMARDFLXXXXXXXXXXXXXSTG 51
           +K+ELD YLDE V+ ++   D++ WWK+   ++PTLQ++ARD L             S  
Sbjct: 429 VKSELDKYLDEPVIPRAVDFDIIDWWKIMGKRFPTLQMLARDILAVPVSRVVSESAFSIA 488

Query: 50  GRLVSPHRNRLDPKTI 3
           GR++SP R++L P T+
Sbjct: 489 GRVLSPQRSKLLPDTL 504


Top