BLASTX nr result

ID: Bupleurum21_contig00034771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034771
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...    89   3e-16
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]    89   3e-16
ref|XP_002266842.2| PREDICTED: ABC transporter C family member 1...    87   1e-15
ref|XP_002331826.1| multidrug resistance protein ABC transporter...    83   2e-14
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...    72   6e-11

>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = +2

Query: 80  IILEKWRKKQASVSIYWWFLVLFHGLTWLLINLPVSVWGKHFSRVPVSILSVLASIFAGV 259
           I+ E  RK Q  + ++WW L L  G TWLL+ L VS+ G++  R P+ ILS+LA +F+G+
Sbjct: 149 ILEENLRKTQIVLPLHWWLLPLLQGFTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGI 208

Query: 260 CFGLSLFTTIIHKELATKIXXXXXXXXXXXXXXXCTYKGLIYNEESDD--NGSDLYAP 427
              LS+F+ I++KE + +I               C YKG  Y EE+D   NGS LY P
Sbjct: 209 TGVLSIFSAIVYKEASVEIVLNVLSLPGAILLLLCAYKGYKY-EETDKIVNGSGLYTP 265


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = +2

Query: 80  IILEKWRKKQASVSIYWWFLVLFHGLTWLLINLPVSVWGKHFSRVPVSILSVLASIFAGV 259
           I+ E  RK Q  + ++WW L L  G TWLL+ L VS+ G++  R P+ ILS+LA +F+G+
Sbjct: 97  ILEENLRKTQIVLPLHWWLLPLLQGFTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGI 156

Query: 260 CFGLSLFTTIIHKELATKIXXXXXXXXXXXXXXXCTYKGLIYNEESDD--NGSDLYAP 427
              LS+F+ I++KE + +I               C YKG  Y EE+D   NGS LY P
Sbjct: 157 TGVLSIFSAIVYKEASVEIVLNVLSLPGAILLLLCAYKGYKY-EETDKIVNGSGLYTP 213


>ref|XP_002266842.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1483

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
 Frame = +2

Query: 80  IILEKWRKKQASVSIYWWFLVLFHGLTWLLINLPVSVWGKHFSRVPVSILSVLASIFAGV 259
           I+ EK RK  +   ++WW L+LFHG TWL++ L VS+WG+H S+ P  +LS+ A + AG 
Sbjct: 99  ILEEKLRKTHSVFPLHWWILLLFHGFTWLILALIVSLWGRHLSKAPFRVLSIFAFLLAGT 158

Query: 260 CFGLSLFTTIIHKELATKIXXXXXXXXXXXXXXXCTYKGLIYNE-ESDDNGSDLYAP 427
               SL   I++KE++ K                C +K    +E E   NGS LY P
Sbjct: 159 ICVFSLSPAIVNKEVSLKTTLDVLSFPGASLLIACVFKDYKDDESEETVNGSGLYTP 215


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1423

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/116 (36%), Positives = 64/116 (55%)
 Frame = +2

Query: 80  IILEKWRKKQASVSIYWWFLVLFHGLTWLLINLPVSVWGKHFSRVPVSILSVLASIFAGV 259
           I+ EK RK Q  + +  W +VLF G TWLL+ L +S+ GKH  R P+ +LS+LAS+ AG+
Sbjct: 45  ILEEKLRKNQTVLPLRSWLVVLFQGFTWLLVGLTISLLGKHLQRTPLRLLSILASLLAGI 104

Query: 260 CFGLSLFTTIIHKELATKIXXXXXXXXXXXXXXXCTYKGLIYNEESDDNGSDLYAP 427
              LS++  I+ + +  +I               C YK  +Y  E ++   D+YAP
Sbjct: 105 VCALSIYNAILGEGMLVRIALDVLSFPGAILLLLCVYK--VYKHEGNEE-RDMYAP 157


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223547514|gb|EEF49009.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/116 (34%), Positives = 62/116 (53%)
 Frame = +2

Query: 80  IILEKWRKKQASVSIYWWFLVLFHGLTWLLINLPVSVWGKHFSRVPVSILSVLASIFAGV 259
           I+ EK RK Q+++ +    L+ F G TWLL++L +S+ GK   R P+ +L+V+A + AG+
Sbjct: 99  ILEEKLRKDQSALPLSRSLLLFFQGFTWLLVSLTISLRGKQLPRTPLRLLAVVAFVVAGI 158

Query: 260 CFGLSLFTTIIHKELATKIXXXXXXXXXXXXXXXCTYKGLIYNEESDDNGSDLYAP 427
              LSLF  I+   ++ K                C YK  +  EE D + + LYAP
Sbjct: 159 VCALSLFAAILGDIVSVKTALDVVSFPGAILMLFCAYKSYV-EEEVDISENGLYAP 213


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