BLASTX nr result

ID: Bupleurum21_contig00034761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034761
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]          84   9e-23
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...    87   7e-22
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...    80   5e-19
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    93   2e-17
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    83   4e-17

>ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]
          Length = 5062

 Score = 84.0 bits (206), Expect(2) = 9e-23
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = -1

Query: 394  DNWLPTLSIVDETSLLLDMWMLQELSKIIVSDENNIQPALSQLSNHLEFTLNFSLKHSSR 215
            D WL TL I D TS  LDM +LQELS I++ D  +++ AL  LSN ++ TL FSLK SSR
Sbjct: 2617 DVWLDTLPINDGTSFFLDMLLLQELSSILLVDRGSLKQALYGLSNLMKETLQFSLKFSSR 2676

Query: 214  PPTDFSPLQKILWTVDAWASGKAEKSKFASFF 119
            PP  F   Q +LWT+D   S    ++K A FF
Sbjct: 2677 PPQTFIAHQNLLWTLDECDSMDTVRAKAAGFF 2708



 Score = 47.8 bits (112), Expect(2) = 9e-23
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -2

Query: 123  FFLELWFKWHTSLWIHCPTHLKS 55
            FFLE+WF+WH SLWIHCP  +K+
Sbjct: 2707 FFLEMWFRWHQSLWIHCPDFVKN 2729


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score = 87.4 bits (215), Expect(2) = 7e-22
 Identities = 44/89 (49%), Positives = 57/89 (64%)
 Frame = -1

Query: 388  WLPTLSIVDETSLLLDMWMLQELSKIIVSDENNIQPALSQLSNHLEFTLNFSLKHSSRPP 209
            WL T  I+D TS  LDM +LQ+LS I++ D    Q AL  +SN +E  +  SL  S+RPP
Sbjct: 2884 WLETRPIIDNTSFFLDMDLLQKLSMIVLVDHKECQLALGSVSNLIESAMKHSLTFSTRPP 2943

Query: 208  TDFSPLQKILWTVDAWASGKAEKSKFASF 122
             +F P QKILWT+DAW S  A  +K AS+
Sbjct: 2944 QNFIPHQKILWTLDAWMSVDAVNAKIASY 2972



 Score = 41.2 bits (95), Expect(2) = 7e-22
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 141  NPNLLAFFLELWFKWHTSLWIHCP 70
            N  + ++ LE+WF WH+SLW HCP
Sbjct: 2966 NAKIASYVLEMWFWWHSSLWSHCP 2989


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score = 80.5 bits (197), Expect(2) = 5e-19
 Identities = 38/79 (48%), Positives = 53/79 (67%)
 Frame = -1

Query: 391  NWLPTLSIVDETSLLLDMWMLQELSKIIVSDENNIQPALSQLSNHLEFTLNFSLKHSSRP 212
            +W   L +VD TS  LD+ +LQ+LS +++ D   +Q AL  +SN LE  L +SL  S+RP
Sbjct: 2830 SWQEALPVVDSTSFFLDIELLQKLSMVVLIDPTELQLALGGVSNMLESALKYSLTFSARP 2889

Query: 211  PTDFSPLQKILWTVDAWAS 155
            P +F P Q ILWT++AWAS
Sbjct: 2890 PQNFVPHQNILWTLEAWAS 2908



 Score = 38.5 bits (88), Expect(2) = 5e-19
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -2

Query: 123  FFLELWFKWHTSLWIHCPTHLK 58
            + LE+WF WH+SLW HCP  ++
Sbjct: 2914 YVLEMWFWWHSSLWNHCPVSVE 2935


>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -1

Query: 394  DNWLPTLSIVDETSLLLDMWMLQELSKIIVSDENNIQPALSQLSNHLEFTLNFSLKHSSR 215
            D+W  T SI+D TS  LDM +LQELS +++ D   +Q ALS  S+ LE+ +NFSL  SSR
Sbjct: 2849 DSWQETHSIIDSTSFFLDMELLQELSLVVLVDAKELQLALSSASDLLEYAMNFSLNFSSR 2908

Query: 214  PPTDFSPLQKILWTVDAWASGKA 146
            PPT F P QK LWT+DAW S  A
Sbjct: 2909 PPTIFLPHQKFLWTLDAWESVNA 2931


>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score = 83.2 bits (204), Expect(2) = 4e-17
 Identities = 46/94 (48%), Positives = 58/94 (61%)
 Frame = -1

Query: 394  DNWLPTLSIVDETSLLLDMWMLQELSKIIVSDENNIQPALSQLSNHLEFTLNFSLKHSSR 215
            D WL TL I D  S  LDM +LQELS I++ D  +++ AL  LSN ++ TL FSLK SSR
Sbjct: 3015 DVWLDTLPINDGASFFLDMLLLQELSSILLVDRGSLKQALYGLSNLMKETLQFSLKFSSR 3074

Query: 214  PPTDFSPLQKILWTVDAWASGKAEKSKFASFFSR 113
            PP  F   Q +LWT+D   S    ++K A FF R
Sbjct: 3075 PPQTFIAHQNLLWTLDECDSMDTVRAKAAGFFLR 3108



 Score = 29.3 bits (64), Expect(2) = 4e-17
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 122  FFSSCGLSGTPHCGYIALLI 63
            FF  CGL G   CG+IAL++
Sbjct: 3105 FFLRCGLDGISPCGFIALIL 3124


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