BLASTX nr result
ID: Bupleurum21_contig00034749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00034749
(375 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29622.3| unnamed protein product [Vitis vinifera] 177 1e-42
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera] 177 1e-42
ref|XP_002519368.1| pentatricopeptide repeat-containing protein,... 167 6e-40
ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containi... 166 2e-39
>emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 177 bits (448), Expect = 1e-42
Identities = 80/125 (64%), Positives = 105/125 (84%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG+SA AI LFK+MI K + PDE+T++SVISACGHLGALE+G W+V L QIKL I
Sbjct: 212 QNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSI 271
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEMRDVISYNTLITGYAAYGHGIETVNLIGKLKDE 360
SG+N++IFMYS+CGS+E+A++VF EM RDV+SYNTLI+G+AA+GHG+E +NL+ +K+
Sbjct: 272 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 331
Query: 361 GIEPD 375
GIEPD
Sbjct: 332 GIEPD 336
>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 177 bits (448), Expect = 1e-42
Identities = 80/125 (64%), Positives = 105/125 (84%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG+SA AI LFK+MI K + PDE+T++SVISACGHLGALE+G W+V L QIKL I
Sbjct: 338 QNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSI 397
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEMRDVISYNTLITGYAAYGHGIETVNLIGKLKDE 360
SG+N++IFMYS+CGS+E+A++VF EM RDV+SYNTLI+G+AA+GHG+E +NL+ +K+
Sbjct: 398 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 457
Query: 361 GIEPD 375
GIEPD
Sbjct: 458 GIEPD 462
Score = 77.8 bits (190), Expect = 9e-13
Identities = 42/117 (35%), Positives = 72/117 (61%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG + A+ LF +M+ N ++PDE T ++VISAC G + +V TL +++I+L
Sbjct: 237 QNGLAEEALRLFDEMV-NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNC 295
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEMRDVISYNTLITGYAAYGHGIETVNLIGKL 351
+L+ MY+K G ++ ARK+F+ M R+V+++N++I GYA G + L ++
Sbjct: 296 FVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM 352
>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 177 bits (448), Expect = 1e-42
Identities = 80/125 (64%), Positives = 105/125 (84%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG+SA AI LFK+MI K + PDE+T++SVISACGHLGALE+G W+V L QIKL I
Sbjct: 370 QNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSI 429
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEMRDVISYNTLITGYAAYGHGIETVNLIGKLKDE 360
SG+N++IFMYS+CGS+E+A++VF EM RDV+SYNTLI+G+AA+GHG+E +NL+ +K+
Sbjct: 430 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 489
Query: 361 GIEPD 375
GIEPD
Sbjct: 490 GIEPD 494
Score = 73.9 bits (180), Expect = 1e-11
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG + + LF +M+ N ++PDE T ++VISAC G + +V TL ++QI+L
Sbjct: 237 QNGLAEEVLRLFDEMV-NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNC 295
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEM-EMRDVISYNTLITGYAAYGH 318
+L+ MY+KCGSI AR++FDE+ R+ +++N +I+ Y G+
Sbjct: 296 FVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGN 342
>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 524
Score = 167 bits (424), Expect = 6e-40
Identities = 76/125 (60%), Positives = 105/125 (84%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG+SA AI LFK+MI KD +PDE+T++S+ISACGHLGALE+G WIV+ + +I+L I
Sbjct: 297 QNGQSAMAIELFKEMIDAKDSQPDEVTMVSIISACGHLGALELGTWIVNFISEYRIELTI 356
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEMRDVISYNTLITGYAAYGHGIETVNLIGKLKDE 360
SGYN+LIFMYSKCG+++EA+++F EME RDV+SYN+LI G+AA+G G E + L+ +K+E
Sbjct: 357 SGYNALIFMYSKCGNMKEAQRIFQEMETRDVVSYNSLIGGFAAHGEGNEAIKLLLSMKEE 416
Query: 361 GIEPD 375
G++PD
Sbjct: 417 GVDPD 421
Score = 60.8 bits (146), Expect = 1e-07
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 33/158 (20%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNG A+ LF MIR V+P+E T +VIS+C G + V L + +IK+
Sbjct: 164 QNGFVEEALKLFNHMIR-LGVQPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIKMNY 222
Query: 181 SGYNSLIFMYSKCGSIEEARKV--------------------------------FDEMEM 264
+L+ M +KCG++E AR + FD+M
Sbjct: 223 FVKTALLDMNAKCGNLEAARGIFNELGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPE 282
Query: 265 RDVISYNTLITGYAAYGHGIETVNLIGKLKD-EGIEPD 375
RD +S+NT+I+GYA G + L ++ D + +PD
Sbjct: 283 RDAVSWNTMISGYAQNGQSAMAIELFKEMIDAKDSQPD 320
>ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 166 bits (419), Expect = 2e-39
Identities = 78/125 (62%), Positives = 98/125 (78%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
QNGES AI LFK+MI +KD KPDE+T++SV SACGHLG L +G W VS L IKL I
Sbjct: 374 QNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSI 433
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEMRDVISYNTLITGYAAYGHGIETVNLIGKLKDE 360
SGYNSLIFMY +CGS+E+AR F EM +D++SYNTLI+G AA+GHG E++ L+ K+K++
Sbjct: 434 SGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKED 493
Query: 361 GIEPD 375
GI PD
Sbjct: 494 GIGPD 498
Score = 61.2 bits (147), Expect = 8e-08
Identities = 33/106 (31%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 QNGESACAINLFKDMIRNKDVKPDEITIMSVISACGHLGALEVGKWIVSTLMREQIKLGI 180
Q+G + + LF DM+ + + +PDE T ++V+S+C LG + + IV L R +
Sbjct: 241 QSGAAQETVRLFDDMLSSGN-EPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNY 299
Query: 181 SGYNSLIFMYSKCGSIEEARKVFDEMEM-RDVISYNTLITGYAAYG 315
+L+ M++KCG++E A+K+F+++ + ++ +++N +I+ YA G
Sbjct: 300 FVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVG 345