BLASTX nr result

ID: Bupleurum21_contig00034713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034713
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15940.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002278953.1| PREDICTED: U-box domain-containing protein 4...   124   6e-27
emb|CAN60531.1| hypothetical protein VITISV_005582 [Vitis vinifera]   124   6e-27
gb|AFN53678.1| U-box domain-containing protein [Linum usitatissi...   102   3e-20
ref|XP_001757463.1| predicted protein [Physcomitrella patens sub...    75   4e-12

>emb|CBI15940.3| unnamed protein product [Vitis vinifera]
          Length = 1052

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/96 (68%), Positives = 78/96 (81%)
 Frame = +1

Query: 1    IKPLVDLLKDDDTSVQIAAVEALSTLALDTYSANFEHIVDELERLGVVTAVILLFIQARP 180
            IKPLVDLL D+DT+VQIAAVEALSTL +DT S NF+  VDELE LGVV A I LF + RP
Sbjct: 897  IKPLVDLLTDEDTNVQIAAVEALSTLVIDT-SNNFKRAVDELEHLGVVEAAITLFTEVRP 955

Query: 181  GELQEKALWMVERMLRVENQTQKNALNQPLVRALVE 288
            G LQE+ LWM+ER+LRVE+   +++LNQ LVRALVE
Sbjct: 956  GILQERLLWMIERILRVESDINRHSLNQSLVRALVE 991


>ref|XP_002278953.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1029

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/96 (68%), Positives = 78/96 (81%)
 Frame = +1

Query: 1    IKPLVDLLKDDDTSVQIAAVEALSTLALDTYSANFEHIVDELERLGVVTAVILLFIQARP 180
            IKPLVDLL D+DT+VQIAAVEALSTL +DT S NF+  VDELE LGVV A I LF + RP
Sbjct: 897  IKPLVDLLTDEDTNVQIAAVEALSTLVIDT-SNNFKRAVDELEHLGVVEAAITLFTEVRP 955

Query: 181  GELQEKALWMVERMLRVENQTQKNALNQPLVRALVE 288
            G LQE+ LWM+ER+LRVE+   +++LNQ LVRALVE
Sbjct: 956  GILQERLLWMIERILRVESDINRHSLNQSLVRALVE 991


>emb|CAN60531.1| hypothetical protein VITISV_005582 [Vitis vinifera]
          Length = 1105

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/96 (68%), Positives = 78/96 (81%)
 Frame = +1

Query: 1    IKPLVDLLKDDDTSVQIAAVEALSTLALDTYSANFEHIVDELERLGVVTAVILLFIQARP 180
            IKPLVDLL D+DT+VQIAAVEALSTL +DT S NF+  VDELE LGVV A I LF + RP
Sbjct: 897  IKPLVDLLTDEDTNVQIAAVEALSTLVIDT-SNNFKRAVDELEHLGVVEAAITLFTEVRP 955

Query: 181  GELQEKALWMVERMLRVENQTQKNALNQPLVRALVE 288
            G LQE+ LWM+ER+LRVE+   +++LNQ LVRALVE
Sbjct: 956  GILQERLLWMIERILRVESDINRHSLNQSLVRALVE 991


>gb|AFN53678.1| U-box domain-containing protein [Linum usitatissimum]
          Length = 719

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/97 (58%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
 Frame = +1

Query: 1   IKPLVDLLKDDDTSVQIAAVEALSTLA-LDTYSANFEHIVDELERLGVVTAVILLFIQAR 177
           IKPL+DLL DD+T+VQIAAVEALSTL   D  S   +  ++E E+L +V AVI LF++ R
Sbjct: 606 IKPLIDLLSDDNTNVQIAAVEALSTLVPADNSSEITKRGMNEFEQLRMVDAVIDLFMKLR 665

Query: 178 PGELQEKALWMVERMLRVENQTQKNALNQPLVRALVE 288
           PGELQEK LWMV++ LR E  + +++LNQ LV ALVE
Sbjct: 666 PGELQEKTLWMVDKFLRAEGCSHRHSLNQALVGALVE 702


>ref|XP_001757463.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162691157|gb|EDQ77520.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 768

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = +1

Query: 1   IKPLVDLLKD-DDTSVQIAAVEALSTLALDTYSANFEHIVDELERLGVVTAVILLFIQAR 177
           I PL++LL++ DD  VQ AAV ALSTL +D    + +  V++L     V  +  LF   R
Sbjct: 652 ISPLIELLEEEDDYGVQEAAVNALSTLLMD--GVDIKGGVEQLAHAEGVQPIFDLFYNVR 709

Query: 178 PGELQEKALWMVERMLRVENQTQKNALNQPLVRALVE 288
            G LQEKA+WM++R+LRVE  TQ  + +Q LV+AL+E
Sbjct: 710 QGRLQEKAVWMIDRILRVEEYTQLYSSDQGLVKALME 746


Top