BLASTX nr result

ID: Bupleurum21_contig00034712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034712
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...   197   7e-49
emb|CBI29073.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arab...   173   2e-41
ref|NP_193700.2| Mitochondrial transcription termination factor ...   171   6e-41

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/147 (63%), Positives = 116/147 (78%)
 Frame = -3

Query: 443 NFHVLCDYGIPQCKIGKTFQEAHEIFRYEYGILATKLREYEELGMSRSTVIKLVTCCPSL 264
           N+HVLCDYGI +  IG+ ++E   IFRYE G+L +K+R YE LG+SRSTVIKLV+CCP L
Sbjct: 152 NYHVLCDYGIARSSIGRMYKEVQAIFRYELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWL 211

Query: 263 LVGRVNSEFVRVFEKLKQLGFQTDWIGGYISDRKSYNWNGILDTIDLLTDVGYDDIQMGL 84
           LVG VNS+FV V +++K LGF++DWIGGY+S + SYNW  + DTID L  VGY + QM  
Sbjct: 212 LVGGVNSQFVMVLKRVKGLGFESDWIGGYLSGKSSYNWKRMHDTIDFLEKVGYSEEQMVS 271

Query: 83  LFKTNPSLLFEGSGKKVFLLVCRLLKL 3
           LFKTNP LLFEGSGKK ++L+ RLLKL
Sbjct: 272 LFKTNPELLFEGSGKKFYVLIGRLLKL 298


>emb|CBI29073.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/138 (63%), Positives = 108/138 (78%)
 Frame = -3

Query: 443 NFHVLCDYGIPQCKIGKTFQEAHEIFRYEYGILATKLREYEELGMSRSTVIKLVTCCPSL 264
           N+HVLCDYGI +  IG+ ++E   IFRYE G+L +K+R YE LG+SRSTVIKLV+CCP L
Sbjct: 251 NYHVLCDYGIARSSIGRMYKEVQAIFRYELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWL 310

Query: 263 LVGRVNSEFVRVFEKLKQLGFQTDWIGGYISDRKSYNWNGILDTIDLLTDVGYDDIQMGL 84
           LVG VNS+FV V +++K LGF++DWIGGY+S + SYNW  + DTID L  VGY + QM  
Sbjct: 311 LVGGVNSQFVMVLKRVKGLGFESDWIGGYLSGKSSYNWKRMHDTIDFLEKVGYSEEQMVS 370

Query: 83  LFKTNPSLLFEGSGKKVF 30
           LFKTNP LLFEGSGKK +
Sbjct: 371 LFKTNPELLFEGSGKKFY 388


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/147 (58%), Positives = 111/147 (75%)
 Frame = -3

Query: 443 NFHVLCDYGIPQCKIGKTFQEAHEIFRYEYGILATKLREYEELGMSRSTVIKLVTCCPSL 264
           NFHVLC+YGIP+ KIG+ ++EA EIF Y YG+L  KL  YE LG+S++TV+KLV+CCPSL
Sbjct: 164 NFHVLCNYGIPRSKIGRMYKEAIEIFGYNYGVLKLKLLAYENLGLSKTTVVKLVSCCPSL 223

Query: 263 LVGRVNSEFVRVFEKLKQLGFQTDWIGGYISDRKSYNWNGILDTIDLLTDVGYDDIQMGL 84
           L+G V+ EFV V  +L + G + D IGGY+S ++SY+W  ++DTI  L  VGY + Q   
Sbjct: 224 LIGGVDREFVNVLGRLNRAGLKNDLIGGYLSAKESYDWKRLIDTIYFLDKVGYSEEQFRD 283

Query: 83  LFKTNPSLLFEGSGKKVFLLVCRLLKL 3
           L KTNP L+FEGSGKKV+LL  RLLKL
Sbjct: 284 LLKTNPVLVFEGSGKKVYLLFGRLLKL 310


>ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
           lyrata] gi|297315807|gb|EFH46230.1| hypothetical protein
           ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  173 bits (438), Expect = 2e-41
 Identities = 83/147 (56%), Positives = 109/147 (74%)
 Frame = -3

Query: 443 NFHVLCDYGIPQCKIGKTFQEAHEIFRYEYGILATKLREYEELGMSRSTVIKLVTCCPSL 264
           NFH LC+YGIP+ KIG  ++EA EIFRYE G+LA KLR+YE LG+S++TVIKLVT CP L
Sbjct: 139 NFHALCNYGIPRGKIGHMYKEAREIFRYESGLLAMKLRDYENLGLSKATVIKLVTSCPLL 198

Query: 263 LVGRVNSEFVRVFEKLKQLGFQTDWIGGYISDRKSYNWNGILDTIDLLTDVGYDDIQMGL 84
           LVG +++EF  V +KLK L    DW+G Y+SDR++Y+W  IL+TI+ L  VG  D  +  
Sbjct: 199 LVGGIDAEFASVVDKLKGLQVGCDWLGRYLSDRRTYSWRRILETIEFLDKVGCKDENLSS 258

Query: 83  LFKTNPSLLFEGSGKKVFLLVCRLLKL 3
           L KT P+L+ EGSGKK ++L  RL K+
Sbjct: 259 LLKTYPALVIEGSGKKFYVLFGRLFKV 285


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 575

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/146 (56%), Positives = 109/146 (74%)
 Frame = -3

Query: 443 NFHVLCDYGIPQCKIGKTFQEAHEIFRYEYGILATKLREYEELGMSRSTVIKLVTCCPSL 264
           NFH LC+YGIP+ KIG+ ++EA EIFRYE G+LA KLR YE LG+S++TVIKLVT CP L
Sbjct: 164 NFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPLL 223

Query: 263 LVGRVNSEFVRVFEKLKQLGFQTDWIGGYISDRKSYNWNGILDTIDLLTDVGYDDIQMGL 84
           LVG +++EF  V +KLK L    DW+G Y+SDRK+Y+W  IL+TI+ L  VG  + ++  
Sbjct: 224 LVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEEKLSS 283

Query: 83  LFKTNPSLLFEGSGKKVFLLVCRLLK 6
           L KT P+L+ EGSGKK ++L  RL K
Sbjct: 284 LLKTYPALVIEGSGKKFYVLFGRLFK 309


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