BLASTX nr result

ID: Bupleurum21_contig00034709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034709
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...   161   7e-38
ref|XP_002327533.1| multidrug resistance protein ABC transporter...   161   7e-38
ref|XP_003627965.1| ABC transporter C family member [Medicago tr...   158   4e-37
ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8...   157   1e-36
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...   154   6e-36

>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score =  161 bits (407), Expect = 7e-38
 Identities = 90/177 (50%), Positives = 104/177 (58%)
 Frame = -3

Query: 536 REKHSNSTRNLVFWAIAKNYWREMVFVGICSFLRTASVALSPLLLYGFVNYSNRGAESXX 357
           REK+S +T NLV  A+AK YW+E VFV IC+ LRT SV +SPLLLY FVNYSNR  E+  
Sbjct: 261 REKNSTNTSNLVLRALAKVYWKETVFVAICALLRTISVVVSPLLLYAFVNYSNRKEENLS 320

Query: 356 XXXXXXXXXXXTCKIIESFSHRQFYFSSRRYGMRMRSALMVAAYQXXXXXXXXXXXRHST 177
                        K++ES S R ++  SRR GMRMRSALMVA YQ           RHS 
Sbjct: 321 EGLFLVGCLVI-AKVVESVSQRHWFLDSRRSGMRMRSALMVAVYQKQLKLSSLGRRRHSA 379

Query: 176 GEIVNYIAVDAYRMGEFPMWFHVVWCSAVQLFLAXXXXXXXXXXXXXXXXXXLFICG 6
           GEIVNYI VDAYRM EF  WFH +W   +QLFL+                  LFICG
Sbjct: 380 GEIVNYIVVDAYRMAEFLWWFHSMWSYMLQLFLSIGVLFVVVGLGALSGLVPLFICG 436


>ref|XP_002327533.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222836087|gb|EEE74508.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1253

 Score =  161 bits (407), Expect = 7e-38
 Identities = 87/155 (56%), Positives = 102/155 (65%)
 Frame = -3

Query: 539 VREKHSNSTRNLVFWAIAKNYWREMVFVGICSFLRTASVALSPLLLYGFVNYSNRGAESX 360
           VREK SNST+NLV  A+AK +++E + VGIC+FLRT +V   PLLLY FVNYSN   E  
Sbjct: 72  VREKSSNSTKNLVLQAVAKIHFKENISVGICAFLRTLAVVALPLLLYAFVNYSNLD-EQN 130

Query: 359 XXXXXXXXXXXXTCKIIESFSHRQFYFSSRRYGMRMRSALMVAAYQXXXXXXXXXXXRHS 180
                         K++ES S R  +F SR+ GMRMRSALMVA Y+           RHS
Sbjct: 131 LHQGLSIVGGLILVKVVESLSQRHCFFYSRQSGMRMRSALMVAIYKKQLNLSSSGRRRHS 190

Query: 179 TGEIVNYIAVDAYRMGEFPMWFHVVWCSAVQLFLA 75
           TGEIVNYIAVDAYRMGEFP WFH  W  A+QLFL+
Sbjct: 191 TGEIVNYIAVDAYRMGEFPWWFHSTWSLALQLFLS 225


>ref|XP_003627965.1| ABC transporter C family member [Medicago truncatula]
           gi|355521987|gb|AET02441.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1463

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/179 (45%), Positives = 107/179 (59%)
 Frame = -3

Query: 539 VREKHSNSTRNLVFWAIAKNYWREMVFVGICSFLRTASVALSPLLLYGFVNYSNRGAESX 360
           VRE+  N+T++LV W+I ++Y +E + +   + +RT +V +SPL+LY FVNYSNR  E  
Sbjct: 259 VRERTKNNTKSLVLWSIVRSYLKENILIAFYALIRTIAVVVSPLILYAFVNYSNR-TEED 317

Query: 359 XXXXXXXXXXXXTCKIIESFSHRQFYFSSRRYGMRMRSALMVAAYQXXXXXXXXXXXRHS 180
                         K+ ES S R ++F+SRR GM+MRSALMVA YQ           RHS
Sbjct: 318 LKQGLSIVGFLVVTKVFESVSQRHWFFNSRRSGMKMRSALMVAVYQKQLKLSSSARKRHS 377

Query: 179 TGEIVNYIAVDAYRMGEFPMWFHVVWCSAVQLFLAXXXXXXXXXXXXXXXXXXLFICGI 3
            GEIVNYIAVD+YRMGEFP WFH+ W SA+QLFL+                  L ICG+
Sbjct: 378 VGEIVNYIAVDSYRMGEFPWWFHITWTSALQLFLSTSVLFIVVGIGALPGLVPLLICGL 436


>ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1469

 Score =  157 bits (396), Expect = 1e-36
 Identities = 81/155 (52%), Positives = 101/155 (65%)
 Frame = -3

Query: 539 VREKHSNSTRNLVFWAIAKNYWREMVFVGICSFLRTASVALSPLLLYGFVNYSNRGAESX 360
           +RE+  N++RNLV W+IA+ Y  E +F+ IC+FLRT    +SPLL+Y FVNYS+   E  
Sbjct: 265 LRERGRNNSRNLVLWSIARVYLNENIFIAICAFLRTICAVVSPLLVYAFVNYSS-SIEEE 323

Query: 359 XXXXXXXXXXXXTCKIIESFSHRQFYFSSRRYGMRMRSALMVAAYQXXXXXXXXXXXRHS 180
                         K++ES S R + F+SRR GM+MRSALM A YQ           RHS
Sbjct: 324 LKQGIAIVGCLIFAKVVESVSQRHWSFNSRRLGMKMRSALMAAVYQKQLKLSALGRRRHS 383

Query: 179 TGEIVNYIAVDAYRMGEFPMWFHVVWCSAVQLFLA 75
           TGEIVNYIAVDAYRMGEFP WFH +  SA+Q+FLA
Sbjct: 384 TGEIVNYIAVDAYRMGEFPWWFHTLMFSALQVFLA 418


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score =  154 bits (390), Expect = 6e-36
 Identities = 84/178 (47%), Positives = 107/178 (60%)
 Frame = -3

Query: 536 REKHSNSTRNLVFWAIAKNYWREMVFVGICSFLRTASVALSPLLLYGFVNYSNRGAESXX 357
           RE+ S+ST NLVF A+A  Y +EM+FVG+C+ LRT SV +SPLLLY FV YS R  E+  
Sbjct: 261 RERSSSSTDNLVFRALAIVYLKEMIFVGLCALLRTISVVVSPLLLYAFVKYSTRDEENWQ 320

Query: 356 XXXXXXXXXXXTCKIIESFSHRQFYFSSRRYGMRMRSALMVAAYQXXXXXXXXXXXRHST 177
                      + K++ES S R ++ ++RR+GMRMRSALMVA YQ           RHS+
Sbjct: 321 EGVFLMGCLIIS-KVVESVSQRHWFLNARRFGMRMRSALMVAVYQKQLKLSSLGRRRHSS 379

Query: 176 GEIVNYIAVDAYRMGEFPMWFHVVWCSAVQLFLAXXXXXXXXXXXXXXXXXXLFICGI 3
           G+IVNYIAVDAY  GEFP WFH  W   +QLFL+                  L +CG+
Sbjct: 380 GQIVNYIAVDAYTTGEFPWWFHSAWSYILQLFLSIGVLFGVVGVGALSGLAPLLVCGL 437