BLASTX nr result

ID: Bupleurum21_contig00034708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034708
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN05532.1| putative reverse transcriptase [Oryza sativa Japo...    63   3e-08
ref|XP_003537342.1| PREDICTED: uncharacterized protein LOC100813...    63   3e-08
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              62   5e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07

>gb|AAN05532.1| putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31432545|gb|AAP54167.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 820

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/83 (42%), Positives = 44/83 (53%)
 Frame = +1

Query: 67  NLMVRLKRALVTEEVLLKQKSRVAWLKEGDGNNRFFFNACNGRWNKNKILAHDNGDGGWL 246
           +L +R+      E+   KQ SRV WLKEGD N RFF    N R  KN I      DG  L
Sbjct: 92  DLKIRILGLAAVEKARKKQASRVKWLKEGDANTRFFHIKMNARRRKNFIHCLQQ-DGNTL 150

Query: 247 HSHKDISVAAVAHFQSTLGVAKE 315
           H+H+D +    AHF S LG  ++
Sbjct: 151 HTHEDKAAHLHAHFNSILGTRRQ 173


>ref|XP_003537342.1| PREDICTED: uncharacterized protein LOC100813584 [Glycine max]
          Length = 977

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/85 (37%), Positives = 51/85 (60%)
 Frame = +1

Query: 37  LSDSQLLEETNLMVRLKRALVTEEVLLKQKSRVAWLKEGDGNNRFFFNACNGRWNKNKIL 216
           LS  +++ + +L V+L  A    E +L+QK+RV WLKEGD N+ +F    N R  KN ++
Sbjct: 242 LSQEEVILKKSLRVQLWDAAYAYESMLRQKARVKWLKEGDNNSTYFHRLINHRRRKN-VI 300

Query: 217 AHDNGDGGWLHSHKDISVAAVAHFQ 291
              + DG W+H H  +  AA+ +F+
Sbjct: 301 QGISIDGVWVHEHCSVKNAAILYFK 325


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 43  DSQLLEE-TNLMVRLKRALVTEEVLLKQKSRVAWLKEGDGNNRFFFNACNGRWNKNKILA 219
           DS+  EE T+L +RLK A + EE    QKSR  W+K GD N+++F      R  +N+I+ 
Sbjct: 161 DSRTSEEITDLTIRLKEAYIDEEQYWYQKSRSLWMKVGDNNSKYFHALTKQRRARNRIIG 220

Query: 220 HDNGDGGWLHSHKDISVAAVAHFQS 294
             + +G W    KD+   AV++F++
Sbjct: 221 LHDENGKWFAEDKDVQHIAVSYFET 245


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
 Frame = +1

Query: 55  LEETNLMVRLKRALVTEEVLLKQKSRVAWLKEGDGNNRFFFNACNGRWNKNKILAHDNGD 234
           + E +++ +    +  EE   KQK+R+ WL  GD N  +F  + NGR N+NK+L+    D
Sbjct: 299 MRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTRED 358

Query: 235 GGWLHSHKDISVAAVAHFQSTLGVAK--EVIS---VPNDLNLPKLSDVQRNQLVR 384
           G  +  H+ +    +A+F   LGV +   V++   + + +NL KLS  Q++ L +
Sbjct: 359 GEVVEGHEAVKSEVIAYFHRVLGVDQMPRVLNEEVMESAINL-KLSSTQQHVLAQ 412


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
 Frame = +1

Query: 58  EETNLMVRLKRALVTEEVLLKQKSRVAWLKEGDGNNRFFFNACNGRWNKNKILAHDNGDG 237
           EE +L+ +L++    +E +LKQKSR+ WL  GD N++FFF A   R  +NKI+   N  G
Sbjct: 328 EEKDLIAQLRKWSTIDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRG 387

Query: 238 GWLHSHKDISVAAVAHFQSTLGVAKEVISVPNDLNL----PKLSDVQRNQLVRP 387
             L  + +I       ++  LG +   +    DL++     KLS     QLV+P
Sbjct: 388 DQLTENTEIQNEICNFYRRLLGTSSSQLEA-IDLHVVRVGAKLSATSCAQLVQP 440


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