BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034679
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   234   4e-60
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   228   5e-58
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   227   7e-58
ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ...   207   7e-52

>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  234 bits (598), Expect = 4e-60
 Identities = 109/153 (71%), Positives = 132/153 (86%)
 Frame = +2

Query: 2   TFYAHKRFKFEIRIEEFQNLLSALCRYKNVKDAEHLLFCNKDVFRLSTKSFNIILNGWCN 181
           TFYAHKRFKF++ I+EFQ+LLSALCRYKNV+DAEHL+FCNKDVF  +TKSFNI+LNGWCN
Sbjct: 221 TFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCN 280

Query: 182 IMGNAREGNRIWWEMHERKIFKDVVSYASMMSCYSKVGRLNDVLRLFNQMKALEIVPDRK 361
           ++G+ RE +RIW EM +R+I  DVVSYAS++SCYSK G L  V +L+NQMK + I PDRK
Sbjct: 281 VIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRK 340

Query: 362 VYNAVIHALAKGKHVKEACNLLKTMEEAGIAPN 460
           +YN+VI ALAKG+HV EA NL+KTMEE GIAPN
Sbjct: 341 IYNSVIFALAKGRHVSEAINLMKTMEEKGIAPN 373


>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  228 bits (580), Expect = 5e-58
 Identities = 109/153 (71%), Positives = 126/153 (82%)
 Frame = +2

Query: 2   TFYAHKRFKFEIRIEEFQNLLSALCRYKNVKDAEHLLFCNKDVFRLSTKSFNIILNGWCN 181
           TFYAHK+FKF + IEEFQNLLSALCRYKNV+DAE LLFCN++VF   TKSFNIILNGWCN
Sbjct: 207 TFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWCN 266

Query: 182 IMGNAREGNRIWWEMHERKIFKDVVSYASMMSCYSKVGRLNDVLRLFNQMKALEIVPDRK 361
           ++G+ RE  R W EM  R I +DVVSY+S++SCYSKV  LN VL+LFNQMK +EI PDRK
Sbjct: 267 VIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDRK 326

Query: 362 VYNAVIHALAKGKHVKEACNLLKTMEEAGIAPN 460
           VYNAV+HALAK   VKEA NL+K ME  GIAP+
Sbjct: 327 VYNAVVHALAKASFVKEALNLMKAMEGKGIAPD 359


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  227 bits (579), Expect = 7e-58
 Identities = 110/153 (71%), Positives = 129/153 (84%)
 Frame = +2

Query: 2   TFYAHKRFKFEIRIEEFQNLLSALCRYKNVKDAEHLLFCNKDVFRLSTKSFNIILNGWCN 181
           TFYA+KRFKF++ IEEFQ+LLSALCRYKNV+DAE L++CNK VF L+TKSFNI+LNGWCN
Sbjct: 149 TFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCN 208

Query: 182 IMGNAREGNRIWWEMHERKIFKDVVSYASMMSCYSKVGRLNDVLRLFNQMKALEIVPDRK 361
           ++G+ RE  R+W EM +R I  DVVSYASMMSCYSK G L  VLRL+ QMK + I PDRK
Sbjct: 209 LIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRK 268

Query: 362 VYNAVIHALAKGKHVKEACNLLKTMEEAGIAPN 460
           VYNAVIHALAKG+ V EA NL+KTMEE G+APN
Sbjct: 269 VYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPN 301


>ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
           gi|449477985|ref|XP_004155184.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Cucumis sativus]
          Length = 485

 Score =  213 bits (543), Expect = 1e-53
 Identities = 106/153 (69%), Positives = 124/153 (81%)
 Frame = +2

Query: 2   TFYAHKRFKFEIRIEEFQNLLSALCRYKNVKDAEHLLFCNKDVFRLSTKSFNIILNGWCN 181
           TFYAHKRF F I +EEFQ+LLSALCRYKNVKDAE+LLFCNKDVF  +TKSFNIILNGWC 
Sbjct: 137 TFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWC- 195

Query: 182 IMGNAREGNRIWWEMHERKIFKDVVSYASMMSCYSKVGRLNDVLRLFNQMKALEIVPDRK 361
           ++G+ R+  R+W EM  R I  D VSYAS +SCYSKV  L+ VLRLF  MK ++I PDRK
Sbjct: 196 VIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRK 255

Query: 362 VYNAVIHALAKGKHVKEACNLLKTMEEAGIAPN 460
           VYNAVIH+LAKG+ +KEA +L+KTMEE GI  N
Sbjct: 256 VYNAVIHSLAKGRCLKEAADLIKTMEEKGIIAN 288


>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317482|gb|EFH47904.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 524

 Score =  207 bits (527), Expect = 7e-52
 Identities = 100/154 (64%), Positives = 121/154 (78%), Gaps = 1/154 (0%)
 Frame = +2

Query: 2   TFYAHKRFKFEIRIEEFQNLLSALCRYKNVKDAEHLLFCNKDVFRLSTKSFNIILNGWCN 181
           TF+A+KRFK E+ I++FQ+LLSALCRYKNV DAEHL+FCNKD +    KSFNI+LNGWCN
Sbjct: 168 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCN 227

Query: 182 IMGNAREGNRIWWEMHERKIFKDVVSYASMMSCYSKVGRLNDVLRLFNQMKALEIVPDRK 361
           ++G+ RE  R+W EM    +  DVVSY+SM+SCYSK G LN VL+LF++MK   I PDRK
Sbjct: 228 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRK 287

Query: 362 VYNAVIHALAKGKHVKEACNLLKTM-EEAGIAPN 460
           VYNAVIHALAK   V EA NL+KTM EE G+ PN
Sbjct: 288 VYNAVIHALAKASFVSEARNLMKTMEEEKGMEPN 321