BLASTX nr result

ID: Bupleurum21_contig00034665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034665
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              285   3e-75
ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...   280   8e-74
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   278   3e-73
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   273   1e-71
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...   263   1e-68

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  285 bits (729), Expect = 3e-75
 Identities = 128/171 (74%), Positives = 149/171 (87%)
 Frame = +1

Query: 1    NSPYRLNDLYYINKQIIPALQRVFALVGADLNQWFQEMPRPGQKIFGKHQFYAQNSSRTR 180
            +SPYRLND YYINKQIIPALQRVF LVGADL QWF EMPRP ++++ KH+ +A N  RTR
Sbjct: 1562 DSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVREVYAKHKSHAPNPYRTR 1621

Query: 181  IDYYYLSKHCILCGELVQASTYVCGKCSKNEATVATAIVGRTSKLEREIQHLADICRHCG 360
            ID+YYLSKHCILCGEL  AS ++C KCSK+   VA A++GRT+KLER+IQHLA ICRHCG
Sbjct: 1622 IDFYYLSKHCILCGELSPASAHICDKCSKDGTAVAAAVIGRTAKLERDIQHLAAICRHCG 1681

Query: 361  GGDWIIESGVKCTSLACSIFYERRKIQKELQSLSAIATEANFYPKCAVEWF 513
            GGDWI+ESGVKCTSLACS+FYERRK+QK+LQ LS++ATEA FYPKC VEWF
Sbjct: 1682 GGDWIVESGVKCTSLACSVFYERRKVQKDLQGLSSVATEAGFYPKCMVEWF 1732


>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  280 bits (717), Expect = 8e-74
 Identities = 123/171 (71%), Positives = 145/171 (84%)
 Frame = +1

Query: 1    NSPYRLNDLYYINKQIIPALQRVFALVGADLNQWFQEMPRPGQKIFGKHQFYAQNSSRTR 180
            +SP+RLND+YYI KQIIPALQRVF L+GADLNQWF EMPRP ++   K   YA N  RTR
Sbjct: 590  DSPFRLNDVYYITKQIIPALQRVFGLLGADLNQWFSEMPRPAREALSKRPSYAPNPQRTR 649

Query: 181  IDYYYLSKHCILCGELVQASTYVCGKCSKNEATVATAIVGRTSKLEREIQHLADICRHCG 360
            IDYYYLSKHC+LCGELVQAS ++C KCS+ E   ATA++GRTSKLE+E+QHLA ICRHCG
Sbjct: 650  IDYYYLSKHCVLCGELVQASAHICNKCSQREIAAATAVIGRTSKLEKEMQHLAAICRHCG 709

Query: 361  GGDWIIESGVKCTSLACSIFYERRKIQKELQSLSAIATEANFYPKCAVEWF 513
            GGDW++ESG+KCTSLACS+FYERRK+Q+ELQ LSA+A +   YPKC VEWF
Sbjct: 710  GGDWLLESGIKCTSLACSVFYERRKVQRELQGLSAVAGDVGLYPKCMVEWF 760


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  278 bits (712), Expect = 3e-73
 Identities = 126/169 (74%), Positives = 147/169 (86%)
 Frame = +1

Query: 1    NSPYRLNDLYYINKQIIPALQRVFALVGADLNQWFQEMPRPGQKIFGKHQFYAQNSSRTR 180
            +SPYRLND YYINKQIIPALQRVF LVGADL QWF EMPRP ++++ KH+ +A N  RTR
Sbjct: 1005 DSPYRLNDQYYINKQIIPALQRVFGLVGADLYQWFSEMPRPVREVYAKHKSHAPNPYRTR 1064

Query: 181  IDYYYLSKHCILCGELVQASTYVCGKCSKNEATVATAIVGRTSKLEREIQHLADICRHCG 360
            ID+YYLSKHCILCGEL  AS ++C KCSK+   VA A++GRT+KLER+IQHLA ICRHCG
Sbjct: 1065 IDFYYLSKHCILCGELSPASAHICDKCSKDGTAVAAAVIGRTAKLERDIQHLAAICRHCG 1124

Query: 361  GGDWIIESGVKCTSLACSIFYERRKIQKELQSLSAIATEANFYPKCAVE 507
            GGDWI+ESGVKCTSLACS+FYERRK+QK+LQ LS++ATEA FYPKC VE
Sbjct: 1125 GGDWIVESGVKCTSLACSVFYERRKVQKDLQGLSSVATEAGFYPKCMVE 1173


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  273 bits (698), Expect = 1e-71
 Identities = 123/166 (74%), Positives = 140/166 (84%)
 Frame = +1

Query: 1    NSPYRLNDLYYINKQIIPALQRVFALVGADLNQWFQEMPRPGQKIFGKHQFYAQNSSRTR 180
            +SPYRLND+YYI+KQIIPALQRVF L+GADLNQWF EMPRPG+  + K   Y  N  RTR
Sbjct: 1027 DSPYRLNDIYYISKQIIPALQRVFGLLGADLNQWFLEMPRPGRDTYAKRPSYGSNPQRTR 1086

Query: 181  IDYYYLSKHCILCGELVQASTYVCGKCSKNEATVATAIVGRTSKLEREIQHLADICRHCG 360
            IDYYYLSKHC+LC ELV AST +C KCS+ E   ATA++GRTSKLERE+QHLA ICRHCG
Sbjct: 1087 IDYYYLSKHCVLCDELVNASTRLCNKCSQKETAAATAVIGRTSKLEREMQHLAAICRHCG 1146

Query: 361  GGDWIIESGVKCTSLACSIFYERRKIQKELQSLSAIATEANFYPKC 498
            GGDW++ESGVKCTSLACS+FYERRK+QKELQ LS IA +  FYPKC
Sbjct: 1147 GGDWLLESGVKCTSLACSVFYERRKVQKELQGLSLIAADKGFYPKC 1192


>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
            [Arabidopsis thaliana]
          Length = 1894

 Score =  263 bits (673), Expect = 1e-68
 Identities = 118/171 (69%), Positives = 142/171 (83%)
 Frame = +1

Query: 1    NSPYRLNDLYYINKQIIPALQRVFALVGADLNQWFQEMPRPGQKIFGKHQFYAQNSSRTR 180
            ++PYRLNDLYYINKQIIPALQRVF LVGADLNQWF EMPR  +   G+    ++NS +TR
Sbjct: 1724 DTPYRLNDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTR 1783

Query: 181  IDYYYLSKHCILCGELVQASTYVCGKCSKNEATVATAIVGRTSKLEREIQHLADICRHCG 360
            IDY+YLSKHCILCGE+VQ S  +C +C +N++  A  IV +TSKLERE+QHLA ICRHCG
Sbjct: 1784 IDYFYLSKHCILCGEVVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCG 1843

Query: 361  GGDWIIESGVKCTSLACSIFYERRKIQKELQSLSAIATEANFYPKCAVEWF 513
            GGDW+++SGVKC SLACS+FYERRK+QKEL+ LS+IATE+  YPKC  EWF
Sbjct: 1844 GGDWVVQSGVKCNSLACSVFYERRKVQKELRGLSSIATESELYPKCMAEWF 1894


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