BLASTX nr result

ID: Bupleurum21_contig00034650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034650
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   119   2e-25
emb|CBI23999.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   113   1e-23
ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   112   3e-23
ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   111   7e-23

>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
           vinifera]
          Length = 940

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/111 (51%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
 Frame = +3

Query: 9   CVVCSKPTTKHCSGCKLVRYCSEACQRSHWNSEHKKTCKSFQVSSKANLKHSGCVSQGKK 188
           C+VC    TK CSGCK VRYCS+ CQ +HW S HK  CK FQ+S KANL  S     G+K
Sbjct: 87  CLVCGNLGTKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQLSGKANLADS-TTHSGRK 145

Query: 189 LSAGGLYNF-------VTKSSKNFNDPKEVLFPYEEFVQLFNWEKPGNPPC 320
            S  G+ N         + +SK     KE+LFPY+EFV+ FNW+KPG PPC
Sbjct: 146 ASGVGVNNSNGIALVPSSGTSKILKQSKEILFPYDEFVEFFNWDKPGFPPC 196


>emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/111 (51%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
 Frame = +3

Query: 9   CVVCSKPTTKHCSGCKLVRYCSEACQRSHWNSEHKKTCKSFQVSSKANLKHSGCVSQGKK 188
           C+VC    TK CSGCK VRYCS+ CQ +HW S HK  CK FQ+S KANL  S     G+K
Sbjct: 11  CLVCGNLGTKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQLSGKANLADS-TTHSGRK 69

Query: 189 LSAGGLYNF-------VTKSSKNFNDPKEVLFPYEEFVQLFNWEKPGNPPC 320
            S  G+ N         + +SK     KE+LFPY+EFV+ FNW+KPG PPC
Sbjct: 70  ASGVGVNNSNGIALVPSSGTSKILKQSKEILFPYDEFVEFFNWDKPGFPPC 120


>ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 729

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 10/116 (8%)
 Frame = +3

Query: 3   PPCVVCSKPTTKHCSGCKLVRYCSEACQRSHWNSEHKKTCKSFQVSSKANLKHSGCVSQG 182
           P C VC+ P  K CS CK VRYCS+ACQ+SHW S HK  CK F+ +S  +   +G +++G
Sbjct: 68  PLCAVCATPAPKKCSRCKAVRYCSQACQQSHWMSGHKTVCKDFRETSARSSAQNGVINRG 127

Query: 183 KKLSAGGLYNFVTKS----------SKNFNDPKEVLFPYEEFVQLFNWEKPGNPPC 320
            K SA G  +  T +          S+     K+VLF Y+EFV+ FNW+KPG PPC
Sbjct: 128 FKASAAGGKSLSTIALIPGCGAGAISRPIKQAKDVLFSYDEFVKFFNWDKPGFPPC 183


>ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 735

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 10/116 (8%)
 Frame = +3

Query: 3   PPCVVCSKPTTKHCSGCKLVRYCSEACQRSHWNSEHKKTCKSFQVSSKANLKHSGCVSQG 182
           P C VC+ P  K CS CK VRYCS+ACQ+SHW S HK  CK+F  ++  +   +G +++G
Sbjct: 69  PLCAVCATPAPKKCSRCKAVRYCSQACQQSHWMSGHKTVCKNFHGTNARSSAQNGVINRG 128

Query: 183 KKLSAGGLYNFVTKS----------SKNFNDPKEVLFPYEEFVQLFNWEKPGNPPC 320
            K SA G     + +          S+     K+VLFPY+EFV+ FNW+KPG PPC
Sbjct: 129 FKTSAAGGKGSSSIALIPDCGDGAISRPIKQAKDVLFPYDEFVKFFNWDKPGFPPC 184


>ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 742

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/119 (46%), Positives = 67/119 (56%), Gaps = 15/119 (12%)
 Frame = +3

Query: 9   CVVCSKPTTKHCSGCKLVRYCSEACQRSHWNSEHKKTCKSFQVSSKA---NLKHSGCVSQ 179
           C VC  P  K CS CK VRYCS+ACQ+ HW SEHK  CK FQ SS +   NL  +   ++
Sbjct: 60  CAVCRNPANKKCSRCKSVRYCSQACQQMHWKSEHKVRCKEFQGSSTSVMMNLAQTEVTNR 119

Query: 180 GKKLSAGGLYNFVTKS------------SKNFNDPKEVLFPYEEFVQLFNWEKPGNPPC 320
             K S+  +      S            S+    PK VLFPY+EFV+LFNW+KPG PPC
Sbjct: 120 VFKASSAAVNRSTCTSSIALIPECGRGTSRTIKQPKSVLFPYDEFVKLFNWDKPGFPPC 178


Top