BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034642
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    70   1e-10
ref|XP_002445371.1| hypothetical protein SORBIDRAFT_07g013770 [S...    68   7e-10
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    67   2e-09
ref|XP_002437024.1| hypothetical protein SORBIDRAFT_10g018285 [S...    65   6e-09
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...    65   8e-09

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = -1

Query: 319 GNGNNLSITGTPWLP-DVNDPYVHSTSEAFDNQKVSSLMVQGENMWDVDLIRDLFDERDA 143
           G+G ++S+   PW+P     P  +  S    + KV SL+    N W++DL+++LFD  D 
Sbjct: 711 GSGASISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDV 770

Query: 142 SLILSIPI-NEDSDDNWYWRFEKLGTYTVKSAY 47
            LI ++PI N + +D   W F K G YTVKS Y
Sbjct: 771 PLISALPIGNPNMEDTLGWHFTKAGNYTVKSGY 803


>ref|XP_002445371.1| hypothetical protein SORBIDRAFT_07g013770 [Sorghum bicolor]
           gi|241941721|gb|EES14866.1| hypothetical protein
           SORBIDRAFT_07g013770 [Sorghum bicolor]
          Length = 340

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/105 (33%), Positives = 58/105 (55%)
 Frame = -1

Query: 319 GNGNNLSITGTPWLPDVNDPYVHSTSEAFDNQKVSSLMVQGENMWDVDLIRDLFDERDAS 140
           G+G NL I   PW+P  +     +         V  L+      WDV+L+ D F E DA+
Sbjct: 24  GDGRNLKIWSDPWIPREDTRLPITPRRGCILTYVDDLIDPATGSWDVELVNDTFWEEDAN 83

Query: 139 LILSIPINEDSDDNWYWRFEKLGTYTVKSAYLELQNARRSSQDNS 5
           LIL++P+N+  ++   W++++ G ++VKSAY E +  R   Q+N+
Sbjct: 84  LILALPVNQGRENVLAWQYDERGLFSVKSAYREWEAMRH--QENA 126


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
 Frame = -1

Query: 316 NGNNLSITGTPWLPDVNDPYVHSTSEA-FDNQKVSSLMVQGENMWDVDLIRDLFDERDAS 140
           +G  + + G  WLPD ++  + +   A FD  KV  L+ +G  +W  D IRD F  RDA 
Sbjct: 396 SGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELITEG--LWREDFIRDKFMARDAD 453

Query: 139 LILSIPINEDS-DDNWYWRFEKLGTYTVKSAYLELQNARRSS 17
           LILSIP+   S +D   W F+  G YT +S Y  L+  R+S+
Sbjct: 454 LILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQST 495


>ref|XP_002437024.1| hypothetical protein SORBIDRAFT_10g018285 [Sorghum bicolor]
           gi|241915247|gb|EER88391.1| hypothetical protein
           SORBIDRAFT_10g018285 [Sorghum bicolor]
          Length = 203

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/91 (36%), Positives = 48/91 (52%)
 Frame = -1

Query: 319 GNGNNLSITGTPWLPDVNDPYVHSTSEAFDNQKVSSLMVQGENMWDVDLIRDLFDERDAS 140
           G+G+ + I   PW+P        +        +V+ L+      WDV L+RDLF E D +
Sbjct: 100 GDGSQVRIWEDPWIPAGLSRRPRTPRGNIILSRVAELIDTNSGTWDVQLVRDLFWEEDVT 159

Query: 139 LILSIPINEDSDDNWYWRFEKLGTYTVKSAY 47
            IL+IP + D DD+  W F+  G + VKSAY
Sbjct: 160 NILAIPTHTDRDDHVAWHFDSKGVFLVKSAY 190


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
 Frame = -1

Query: 319 GNGNNLSITGTPWLPDVND-----PYVHSTSEAFDNQKVSSLMVQGENMWDVDLIRDLFD 155
           G+G  + I   PWLP         P  HS  E+ D      L+      WD  L+ DLF 
Sbjct: 237 GDGAGIHIWSDPWLPRDESRKPLTPRGHSLVESVDE-----LIDPHTGTWDEQLVSDLFW 291

Query: 154 ERDASLILSIPINEDSDDNWYWRFEKLGTYTVKSAY 47
           E DA++IL++PI++  ++   W FEKLG ++VKSAY
Sbjct: 292 EEDAAVILALPIHQGRENFISWHFEKLGIFSVKSAY 327