BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034640
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518269.1| PREDICTED: uncharacterized protein LOC100777...    88   1e-15
ref|XP_003612776.1| hypothetical protein MTR_5g028890 [Medicago ...    67   7e-15
ref|XP_002439641.1| hypothetical protein SORBIDRAFT_09g017840 [S...    67   3e-09
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    63   5e-08
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    60   2e-07

>ref|XP_003518269.1| PREDICTED: uncharacterized protein LOC100777373 [Glycine max]
          Length = 3038

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 48/100 (48%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
 Frame = +1

Query: 214 QPYTYPPYGQWPQQW-TAPPCPYPSSPMQQQRPTQQT--------SILGPKPQQAYSTST 366
           Q   +  +  W  QW   PPCPYP+S    +     T         ILG +PQ AY+   
Sbjct: 252 QQQPWAAWAPWLAQWPNPPPCPYPASSWALKNVVTPTVGPRQSRPGILGLRPQ-AYNA-- 308

Query: 367 VQPPVGYTPTDIEAAMHTLSLTQPDRNWYMDTGATSHMTS 486
           + PP  YTPTDIEAAMH LS +QPD N+YMDTGATSHM++
Sbjct: 309 IAPPTSYTPTDIEAAMHALSFSQPDGNFYMDTGATSHMSA 348


>ref|XP_003612776.1| hypothetical protein MTR_5g028890 [Medicago truncatula]
           gi|355514111|gb|AES95734.1| hypothetical protein
           MTR_5g028890 [Medicago truncatula]
          Length = 175

 Score = 67.0 bits (162), Expect(2) = 7e-15
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
 Frame = +1

Query: 262 APPCPYPSSPMQQQRPTQ----------QTSILGPKPQQAYSTSTVQPPVGYTPTDIEAA 411
           +P  P P++   Q R T+          Q+    P   Q   T      V YTPTDI+AA
Sbjct: 54  SPRQPKPTNYHWQSRQTRSQNHQNGTWNQSRAYPPWVSQNQQTHMASAQVSYTPTDIQAA 113

Query: 412 MHTLSLTQPDRNWYMDTGATSHMTSDQ 492
           M TLS+  PD  WYMDTGATSHMT  Q
Sbjct: 114 MQTLSMAPPDEQWYMDTGATSHMTDLQ 140



 Score = 38.9 bits (89), Expect(2) = 7e-15
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 494 DLQTGNNLMRCNSSGELYPLST 559
           DLQTG  LMRC+SSG+LYPL+T
Sbjct: 138 DLQTGIPLMRCDSSGDLYPLTT 159


>ref|XP_002439641.1| hypothetical protein SORBIDRAFT_09g017840 [Sorghum bicolor]
           gi|241944926|gb|EES18071.1| hypothetical protein
           SORBIDRAFT_09g017840 [Sorghum bicolor]
          Length = 787

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/113 (36%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
 Frame = +1

Query: 199 PFAVPQPYTYPPYGQWPQQWTAPPCPYPSSPMQQQRPTQQTSILGPK----------PQQ 348
           P A P    Y P+      W  P  P P +P     PT Q  + GP           P  
Sbjct: 376 PPAAPTANYYNPWTGSIYMWPGPRAPTPHAPAP---PTHQAYVAGPPAQWVGHWGVPPLA 432

Query: 349 AYSTSTVQPPVGYTPTDIEAAMHTLSLTQP-DRNWYMDTGATSHMTSDQGFTD 504
                   PP G+    + A+  T+SLTQP  R+WY DTGATSHM SD G +D
Sbjct: 433 PVPAPQSPPPPGWDQQALAASFETMSLTQPPQRDWYFDTGATSHMASDTGSSD 485


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
 Frame = +1

Query: 217 PYTYPPYGQWPQQWTAPPCPYPSSPMQQ--------QRPTQQTS-----ILGPKPQQ--- 348
           P+TY        QW  PP   P  P QQ        Q P Q T+     ILGP P Q   
Sbjct: 269 PWTYN------NQWQHPPFYAPMQPPQQHTGYPTFGQGPFQPTNAAHPGILGPHPSQPTH 322

Query: 349 ------AYSTSTVQPPVGYTPTDIEAAMHTLSLTQPDRNWYMDTGATSHMTSDQG 495
                  Y   T   P+   P  +  A +T++L +PD NWYMD+ ATSH+TS+ G
Sbjct: 323 AAHMANVYPYPTPSAPMSQLPPGLIHAFNTMTLQEPDPNWYMDSAATSHITSNIG 377


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = +1

Query: 193 PRPFAVPQPY--TYPPYGQWPQQ-WTAPPCPYPSSPMQQQRPTQQTSILGPKPQQAYSTS 363
           PR +   QP+  T  PY  WPQQ W   P   P + +    P     +LG  PQ A   S
Sbjct: 218 PRNWQTQQPWLSTPTPYPHWPQQNWMQRP---PMAYLTATNPA--AGLLGSSPQAAMVGS 272

Query: 364 TVQPPVGYTPTDIEAAMHTLSLTQP-DRNWYMDTGATSHMTSDQG 495
           T Q  +   P ++ AA  T ++  P D +WYMDTGAT+H+T+  G
Sbjct: 273 TNQ--LTQIPANLAAAFGTTTMPDPTDASWYMDTGATTHLTAQPG 315